Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01133 ATGAGGTGGGAAAAGGTTCAAGTAAATCCCTTACAGGGTCAAGGAGTAGCTCAACAAGGAGTGGTTGAGCTATCTGGGCCAGGCAAGAGGTGGGGACATTCCTGCAACGCCATTAAAGGTGGGAGACTTCTCTATGTCTTCGGGGGTTACGGCAAAGATAACTGCCAGACAAACCAAGTGCATGTCTTTGACACTGGTGGGTCTACTTCAAAGTTTCATAAGCTTTTctgttttatctatttttcacATTCTCTGTCTATGGAATTTGTGACACAATGGTTTCGCATTGTTGCTTGCTTGGTGTTGTCTGATGAAATTTGGCGGTTTCTTATAATATACTGGGTGCTAGATTTTATTGCACTATTGTATTCGCGCCTTTGCTCTTTTCCCCCTCCATTCGTGCTTCTGGTTATGAATCTCATGGCAGTCATGCAGACTTGGATCCTACCGGTGATAAAAGGCACTCCTCCAACTCCCAGGGACAGCCATAGCTGCACAACTATTGGTGACAATCTATTTGTTTTTGGGGGAACAGACGGGGTGAACCCTCTCAAGGACTTGCACATACTAGACACTTCTATGCATACGTGGATTTCTCCCGGTGTACGAGGAGAAGGACCAGAGGCACGTGAGGGTCATAGTGCAGCCCTTGTTGGTAAACGGCTTTTCATATTTGGCGGTTGTGGAAAATCTGcagataataataatgaggTTTACTACAATGATCTTTACATACTGAACACAGAGACTTTTGTTTGGAAGTGTGTGGTGACATCTGGCACTCCCCCATCTCCTCGTGATAGCCATACTTGTTCTTCTTGGAAAAACAAAGTTATTGTCATAGGTGGTGAAGATAGACATGATTATTACTTGTCTGATGTTCATATCCTTGATACAGATACTCTAATTTGGAGGGAGCTGAATACATCTGGCCAGTTGTTACCACCACGAGCTGGTCATTCTACAGTTTCTTTTGGCAGGaacttgtttgtttttggaGGGTTTACAGATGCCCAAAATTTATACAACGACCTTTATATGCTTGATGTTGATACTGGTATTTGGACTAGGGTGGCGACTGCAGGTGTTGGACCTTCTGCCAGATTTTCTGTTGCTGGCGACTGTTTAGACCCAGTTAAAGGTGGTGTTCTTGTTTTCATCGGGGGTTGTAATAAAAATCTCGAGGCCTTGGATGATATGTTTTACCTTTATACAGGTCTTGCTCGGGAAACTGAACAGAGACCAGAGAAGTTATCTTTGAGGAAGCAATTGAAGCTGAAATGCCAAGAACAAAATGTCAATACTGTACAAAACCAAGGTCTGTTTAGATATGGCGTGGGTGCTGATGTTAGCCAGCCCATGACAATGCTGGGTTATAGCCAGCCAAGCTTACAAAATATACCATTAAAGCAATCCATGCCTTCTGGAAAGGTACCATTTCAAGCCAAGGTTACTGGAAGCATGTCAGAAGGATATAGAATTGAAACTGTTATTGATGGAAAGCCTCTTCATGGAATTCTGTTTCCAAACAAGCCAAACTTTAACTTTCCGCACCCAACTACTGCCACATCCAGTGGGAAAAGGGCTGCTACTGAAACTGGTAGTGTCATCTCGGGTGGTATGGatccaaacaaattaaagaaatctaAGGCGCTTAAGCAGGATGAAATAGAAGACAGACAGATAGATGTTATTCAGAGAGACAGTTCAGCATCTAACGAGAACCGCACAGAAGCTGTTGCCACTCTGATTCCAGGCAACCCTACTGTTGATACATCCGAGCCCCTTAAGGTTTCTGTCAACAAATTACCAGAAGCTGTTTCTTTGAATCCgaatgatgataaaaaaaatgacataccAAGATCCTTAGGTGAGGGTTCAAGAAATGATGGAGCAAATGATGCGCCTAGTTCCATAATTGATCTCACAACTGTTGATAAAGCAAATGAAATGCCAAGGTCCGAAACTAATATCCCAATTGgagataaatcaattaatgtgGCAAGTTCCATAACTGATGATGTGCCAAGTTCCAGTGCTGATGTCCCTACCGATGATAAAGCAAATGATGCATCAATTTCCAAAACTGATGATAGAACAAATGATGTGCCTAGTTCTAGTGCTGATGTCCGTACTGATGATAAAACAAATGATGCACCAATTTCCAACACTGGTGAACCATCTGATGATAGAACAAATGATGTGCCAAGTTCTAATACGGATGTCCCTACTGATGACAAAACAAACGATGCACCAATTTCTGAAACTGGTGGCCCAACTAGCGATAGAACAAATGTTGCGCCAGTTTCCAGTTCTGAAGTCCCGAGACATGATCAAGCAAGTGATGAACCAATCTGCAGCACTGAAGTTCTGAAACCAGCAGCAGCTGAGAGTGTTCTGTCTCTGTCAAATCAAGATTGCACAGGTGCAAgtatagaagaaaagaacGAACCATCGAAATCAAGTTG 2468 0.4109 MRWEKVQVNPLQGQGVAQQGVVELSGPGKRWGHSCNAIKGGRLLYVFGGYGKDNCQTNQVHVFDTGGSTSKFHKLFCFIYFSHSLSMEFVTQWFRIVACLVLSDEIWRFLIIYWVLDFIALLYSRLCSFPPPFVLLVMNLMAVMQTWILPVIKGTPPTPRDSHSCTTIGDNLFVFGGTDGVNPLKDLHILDTSMHTWISPGVRGEGPEAREGHSAALVGKRLFIFGGCGKSADNNNEVYYNDLYILNTETFVWKCVVTSGTPPSPRDSHTCSSWKNKVIVIGGEDRHDYYLSDVHILDTDTLIWRELNTSGQLLPPRAGHSTVSFGRNLFVFGGFTDAQNLYNDLYMLDVDTGIWTRVATAGVGPSARFSVAGDCLDPVKGGVLVFIGGCNKNLEALDDMFYLYTGLARETEQRPEKLSLRKQLKLKCQEQNVNTVQNQGLFRYGVGADVSQPMTMLGYSQPSLQNIPLKQSMPSGKVPFQAKVTGSMSEGYRIETVIDGKPLHGILFPNKPNFNFPHPTTATSSGKRAATETGSVISGGMDPNKLKKSKALKQDEIEDRQIDVIQRDSSASNENRTEAVATLIPGNPTVDTSEPLKVSVNKLPEAVSLNPNDDKKNDIPRSLGEGSRNDGANDAPSSIIDLTTVDKANEMPRSETNIPIGDKSINVASSITDDVPSSSADVPTDDKANDASISKTDDRTNDVPSSSADVRTDDKTNDAPISNTGEPSDDRTNDVPSSNTDVPTDDKTNDAPISETGGPTSDRTNVAPVSSSEVPRHDQASDEPICSTEVLKPAAAESVLSLSNQDCTGASIEEKNEPSKSS 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01133 822 SUPERFAMILY Kelch motif 144 405 IPR015915 GO:0005515
Bva06g01133 822 Gene3D - 257 436 IPR015915 GO:0005515
Bva06g01133 822 Pfam Kelch motif 159 197 IPR006652 GO:0005515
Bva06g01133 822 MobiDBLite consensus disorder prediction 659 685 - -
Bva06g01133 822 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 1 66 - -
Bva06g01133 822 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 142 535 - -
Bva06g01133 822 Gene3D - 1 91 IPR015915 GO:0005515
Bva06g01133 822 MobiDBLite consensus disorder prediction 688 716 - -
Bva06g01133 822 MobiDBLite consensus disorder prediction 603 786 - -
Bva06g01133 822 SUPERFAMILY Kelch motif 26 71 IPR015915 GO:0005515
Bva06g01133 822 PANTHER KELCH REPEAT DOMAIN 142 535 - -
Bva06g01133 822 MobiDBLite consensus disorder prediction 609 623 - -
Bva06g01133 822 MobiDBLite consensus disorder prediction 717 775 - -
Bva06g01133 822 MobiDBLite consensus disorder prediction 519 547 - -
Bva06g01133 822 Pfam Galactose oxidase, central domain 316 360 - -
Bva06g01133 822 Pfam Galactose oxidase, central domain 30 65 - -
Bva06g01133 822 Pfam Galactose oxidase, central domain 265 311 - -
Bva06g01133 822 PANTHER KELCH REPEAT DOMAIN 1 66 - -
Bva06g01133 822 Pfam Kelch motif 207 251 - -
Bva06g01133 822 Gene3D - 137 256 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01133 Bva-Chr6 8997881 9004220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01133 159 391 Acyl Lipid Metabolism Gene Families AT3G05420 30.544 1.14e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01133 - - gmx:100820222 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01133 06 8997881 9004220 Bva06g01133 06 8997881 9004220 ECH