Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01129 ATGCCGCCGTTTCTGTCTCTGCAACTTCGGAGGCTCCTACTTCGATCcctctcttcttctccctCATGCTCCCCcgtttcttcttctctgatTCAACAATGTCGATTAATTCCATCAGAACCCTCTACTAATTTCGCCTCCTTCTTTCGCCATTTTCTACCTATCAACCTTTTCACTCCACCTGGAATTTTCGCTTCTAGACATTTCTCATCGCAACCCTCTGATATCCAAAGCGAAGGCAAACCCGAAGACTCAGATCCAATTGCCCAGTCAATCTCTGCCGAGCTTCTCAAAGACCCGGATTCAGACCCTGTCTCTGTCACCCAGCGTCTCCAACTCAGCTTCTCTCACATCACTCCCACTCCGACGTTAATTCTTCAAACGCTCAATCTGATTCCTGAAGCTGGCCGCACAGTGTTAGGGTTTAACCAATGGTTGATCTCAAACCCTAGTTTCACTCACACTGACGAGACACTCTCGTTTTTCATCAACTTCTTCGGCCGCCGCAAAGATTTCAAGGCGGCCCACGATGTTCTTGTCAGTGGTCGTGGCGTTGCAGGGCCTAAAACCCTGGAATCAGCTATTGATCGGCTTGTGCGAGCTGGTCGCCCCACCCaagttgtttccttttttgagAGAATGGAGAAAGATTACGGATTGAAACGTGATCGTGATTCGTTAAAGCTTCTTGTTGAAAAGCTTTGTGAAAAAGGATATGCAAATTATGCTGAGAAAATGGTGAAGAATTTGGCCAACGAGTTCTTTCCTGATGGATCCATATGTTATTTGCTGATTAAGGGTTGGTGTATTGATGGGAAGCTAGATGAAGCTCAAAGGCTTGCTGGGGAGATGTATAGGGGAGGATTTGAGCTTGGAACCACGGCATATAACGCCATGCTTGATTGTATGTGCAAGCTTTGCAGAAAAAAGGACCCTTTTCGTCTTGATTCCGAGGCAGAGAAGATCTTGGTGGATATGGATTATCATGGGTTTCCGAGGAATGTAGAGACCTTTAATGTATTGATAACTAATTTGTGTAAGATTAGGAGGACTGAAGATGCACTGAAGATGTTTCAAAGAATGGGAGAGTGGGGATGCTATCCCAATGAGACCACATTTCTCGTTTTAACTAAAAGTTTGTACCAAGCTGCAAGGTTAGAAGAGGGTGATGAAATGATTGATAGGATGAAATCTGCTGGATATGGTGAAGCTCTGGATAAGAAGGCATACTATGagtttttgaagattttgtgCGGCATTGAAAGAATTGATCATGCTTTGAGTGTTTTTGCCAAGATGAAAGCCGATGAATGTGAGCCTGGGATCAAAACTTATGATTTGTTGATAGGGAAATTGTGTGCACATAATCGTCTTGATAAGGCTAATTCTCTCTTCAATGATGCTCAAAGCAGAGGAGTGCCAGTGATACCCAAAGCATACAAGGTAGAACCAAGGTATATGAAGAAGCCGAAGGTTGTGAAGAGTGAAAAGAAGCGGGAGACATTACCAGAAAAAATGGCTAGGAAAAGAAGACGTCTAAAACAAATTCGATTGAGTTTTGTGAAGAAGCCAAAAAAGATGAAGCGTCGAGCTTTCTA 1598 0.4205 MEKDYGLKRDRDSLKLLVEKLCEKGYANYAEKMVKNLANEFFPDGSICYLLIKGWCIDGKLDEAQRLAGEMYRGGFELGTTAYNAMLDCMCKLCRKKDPFRLDSEAEKILVDMDYHGFPRNVETFNVLITNLCKIRRTEDALKMFQRMGEWGCYPNETTFLVLTKSLYQAARLEEGDEMIDRMKSAGYGEALDKKAYYEFLKILCGIERIDHALSVFAKMKADECEPGIKTYDLLIGKLCAHNRLDKANSLFNDAQSRGVPVIPKAYKVEPRYMKKPKVVKSEKKRETLPEKMARKRRRLKQIRLSFVKKPKKMKRRAF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01129 319 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 193 227 IPR002885 -
Bva06g01129 319 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PNM1, MITOCHONDRIAL 1 318 - -
Bva06g01129 319 Gene3D Tetratricopeptide repeat domain 1 97 IPR011990 GO:0005515
Bva06g01129 319 TIGRFAM PPR: pentatricopeptide repeat domain 124 157 IPR002885 -
Bva06g01129 319 TIGRFAM PPR: pentatricopeptide repeat domain 231 261 IPR002885 -
Bva06g01129 319 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 44 78 IPR002885 -
Bva06g01129 319 Gene3D Tetratricopeptide repeat domain 193 315 IPR011990 GO:0005515
Bva06g01129 319 Gene3D Tetratricopeptide repeat domain 98 192 IPR011990 GO:0005515
Bva06g01129 319 PANTHER ATPASE EXPRESSION PROTEIN 3 1 318 - -
Bva06g01129 319 Pfam PPR repeat family 121 167 IPR002885 -
Bva06g01129 319 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 228 262 IPR002885 -
Bva06g01129 319 Pfam PPR repeat 51 75 IPR002885 -
Bva06g01129 319 Pfam Pentatricopeptide repeat domain 211 237 IPR002885 -
Bva06g01129 319 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 121 155 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01129 51 313 Miscellaneous Gene Families AT4G11690 22.433 1.34e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01129 - - cmax:111465769 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01129 06 8975948 8977686 Bva06g01129 06 8975948 8977686 ECH