Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01119 ATGGCAGAAAGCAGCTACAAAGAAATCCAAATCCGAACCCTAACCGGTGAATCCATAACTGTATGTATCTCTAGTACCAGAACAGTTCGAGACCTCAAGCTTCTACTCAAGCGCATTTTCCCTCCCGCCGTTAACTCTCCCAATTTCCACCTATTCTTCGAGCGTGCACAATTGAGATTGGAGGATCAAATTAGTCGTTACAACATCGAAAGCAGTAAATTTGTCGTTTTGGTTCCATTTGCTAAGAAAGAATCAATCCTGACCAAGAAGTCAGACCAATCCGAAAAAGGAGCTTCTGTAACTTCCTCGACTGTAGCTGATAGAGCTCCAATATCTAATCTTGCTGAATCTACATGGTCGAATATTATGGAAGATTTAACATACTTACAGGATTTTGATTCTGAAAAGCAGCTGGGGCTTTCTTATCATCTTACATTGAATGAACTGCAATCTACAAGTGAGGGTGCTCTTGGTGACCATAACTGTCAAGTCTTTGTTAAGCATTTGGAGTCGTGTAAGAAAACAACCGCAACTTTATTAGAAGAAGCACTAAGTCAACTTGGAAAGTTTGGAGTTAAACTGGGTATTCAGGACATGAAGCATCTTGCCCTTCTATGTCCTAAGCTAATATGTTTTCAAAATGATGAAGAGAAGACATGTTTTGATGATATCATTGTTGTCATCAACCATCCAACAAGAGATAAGGATCAAATCGGATATAATCCTAAAAGAGAAGTTCGCAAACAGCTGAAAGTTTCAAAGGTTGTCAGTACCTTGAAGAGAAGGGACAGATCTTTCCGAAACAATCTGTGGCAGACTTTTGAACAGCAGCACTTATTTGGAGATAAGATGGCTGTGGAAACTTCCCTGGAAGATTTACTATCATCAATCATGCACCACCAAAGTTCTActggaaatgaaaataaagcaaaacgCATGAAGAGAAGTTCAACCTCCTCAAAATATTCTAAGAATCATATTTGGTGCCATGACACAACGTCATTGATGGCCTTGGAAATGGTTGAACATCTTCAGAAAGGAATTGGATCTGAAGGAcagATTGTGCATGTTGAAGACATTTCTACCAGGAAAGCCATTCATGCAGAAATCCCAATTGAATTATCCAAAAACATGCGATCAGCACTGGAGTCTATTGGAGTTTCTAAATTGTATAGTCACCAGGTAGAGTCTGTACAAGCCTCCCTTACTGGGAAGGATGTTGTTGTGGCAACAATGACATCTAGTGGCAAATCTCTTTGCTACAACCTGCCAGTTCTAGAAGTGTTGTCGAAGAACTCTTCATCATGTGCTTTGTATATATTTCCAACAAAGGCGTTAGCTCAAGATCAACTAAGGGCTTTGTTAGACATGACAAAGGGATTTAATTTTGACTTCATATTCAATATAGGCATATATGATGGTGACACCCCTCATAATGAGAGGGCATGGCTGCGTGATAATTCTAGACTGTTGATCACAAATCCAGATATGTTACACATATCTATCTTGTCTCACCATCGGCAATTTACTCGTATTTTATCAAATCTCAGGTTTGTGGTAATTGATGAAACTCATACCTATAAGGGAGCATTTGGATGTCATACTGCCCTTATATTAAGGAGGCTCAGGCGACTCTGCTCACATGTGTACGGAACTGATCcttgctttgttttttctacTGCAACTTCTGCAAATCCTCGTGAGCATTGTATGgAACTTGCAAATTTATCAACACTAGAGCTGGTTAAGAATGATGGAAGTCCATCAGCTAGGAAGCTTTTCATCCTTTGGAATCCTATTCTGCGTCCAATAGCATTCTCGAAGAAAGCTCAATTTGTTGCCAGCACTGATGAGTTTGCAGATGAAAGTGCTAATCTTGTTCGTTCAAGCTCAATTATAGATGTTTCGCGCCTTTTTGCGGAAGTGGTTCAGCATGGTCTTCGTTGCATCACATTTTGTAAATCACGGAAACTTTGTGAACTTGTTTTATCTTATACACGTGAGATTCTTCAGGAGATAGCTCCACATCTGGTGGATTCAATATGTGCATATCGTGGAGGTTACATTGCAGagGAGAGGAGAAAAATAGAGAGTGAATTCTTTAGTGGTAAAGTTTGTGGTGTTGCTGCAACCAATGCTCTTGAGTTGGGCATTGATGTTGGATACATTGATGTGACTTTGCATTTAGGATTTCCTGGTAGCATTGCTAGTTTGTGGCAACAAGCTGGGAGGGGTGGGAGGAGAGATAGACCATCTCTTGCTGTCTATGTTGCATTCGGAGGGCCTCTTGATCAATACTTTATGAACCATCCAAAGAAATTGTTTGAACGACCTATTGAATGCTGTCACGTCGATGCCCAAAACAAGAAGGTTCTTGAACAGCATTTAGTCTGTGCAGCTCATGAACATCCTTTGAGTTTGCATTATGATGAGAAGTACTTTGGTTCTGGATTAAAGAGTGCTGTAGATTCTCTTAATGCTAGAGGATACCTGAGTTGTAATTTGTCATCCGGTTCTTCTGCTAAAATATGGAATTACATTGGTCCGGAGAAACTACCTTCACATTCAGTTAATATCCGAGCAATAGAAACTGTGAGATACACAGTCATAGATCAGCGAAAAAATCAAGTCCTTGAAGAGATAGAAGAAAGCAAGGCCTTCTTTCAGGTATACGAAGGTGCTGTGTACATGAACCAAGGGAAGACCTATTTAGTTGACAAATTAGATCTATCTAGCAAGACTGCTTTCTGCAAAGAGGCTGATCTGAAGTATTATACAAAGACTCGAGATTACACTGATATTCATGTCGTTGGGGATAGTATTGCTTATCCAGTAAAGACAAAAGCCCTAGTTCAGGCATGTGAAGTAAAAACTACGTGGTTCGGCTTCTATCGTATTCGGAGAGGAAGCAATGAAATCTTTGATGCCGTCGATCTAACACTTCCTCAATATTCTTATGAGTCACAGGCAGTTTGGGTTCCGGTGCCACAGTCAATCAAAGAAGCAGTACTCAAGAAAAACTATGATTTTCGTGCAGGTTTACATGCTGCATCACATGCTGTTTTGAATGTAGTGCCTCTACATGTAATATGCAACTTGTCTGACTTGGCTCCTGAGTGTCCAAATCCTCATGATAGCCGTCgttattttgaaagaattctGATATATGATCAACATCCTGGAGGTGCTGGTTTATCAATACAGGTGCAAcccattttcagaaaattgcTGGCAGCTGCGCTAGAGCTCCTCACATCTTGCCGCTGTTCAGTGGAAGTGGGTTGCCCTAACTGTGTTCAGAGCTTTGCTTGTCACGAGTATAACGAGGTCATACACAAGGATGCGGCCATTATGATCATCAAGGGTGTTATGGATGCAGAGAACTTGTACATTGAGGGTATGTGCTG 3407 0.3974 MAESSYKEIQIRTLTGESITVCISSTRTVRDLKLLLKRIFPPAVNSPNFHLFFERAQLRLEDQISRYNIESSKFVVLVPFAKKESILTKKSDQSEKGASVTSSTVADRAPISNLAESTWSNIMEDLTYLQDFDSEKQLGLSYHLTLNELQSTSEGALGDHNCQVFVKHLESCKKTTATLLEEALSQLGKFGVKLGIQDMKHLALLCPKLICFQNDEEKTCFDDIIVVINHPTRDKDQIGYNPKREVRKQLKVSKVVSTLKRRDRSFRNNLWQTFEQQHLFGDKMAVETSLEDLLSSIMHHQSSTGNENKAKRMKRSSTSSKYSKNHIWCHDTTSLMALEMVEHLQKGIGSEGQIVHVEDISTRKAIHAEIPIELSKNMRSALESIGVSKLYSHQVESVQASLTGKDVVVATMTSSGKSLCYNLPVLEVLSKNSSSCALYIFPTKALAQDQLRALLDMTKGFNFDFIFNIGIYDGDTPHNERAWLRDNSRLLITNPDMLHISILSHHRQFTRILSNLRFVVIDETHTYKGAFGCHTALILRRLRRLCSHVYGTDPCFVFSTATSANPREHCMELANLSTLELVKNDGSPSARKLFILWNPILRPIAFSKKAQFVASTDEFADESANLVRSSSIIDVSRLFAEVVQHGLRCITFCKSRKLCELVLSYTREILQEIAPHLVDSICAYRGGYIAEERRKIESEFFSGKVCGVAATNALELGIDVGYIDVTLHLGFPGSIASLWQQAGRGGRRDRPSLAVYVAFGGPLDQYFMNHPKKLFERPIECCHVDAQNKKVLEQHLVCAAHEHPLSLHYDEKYFGSGLKSAVDSLNARGYLSCNLSSGSSAKIWNYIGPEKLPSHSVNIRAIETVRYTVIDQRKNQVLEEIEESKAFFQVYEGAVYMNQGKTYLVDKLDLSSKTAFCKEADLKYYTKTRDYTDIHVVGDSIAYPVKTKALVQACEVKTTWFGFYRIRRGSNEIFDAVDLTLPQYSYESQAVWVPVPQSIKEAVLKKNYDFRAGLHAASHAVLNVVPLHVICNLSDLAPECPNPHDSRRYFERILIYDQHPGGAGLSIQVQPIFRKLLAAALELLTSCRCSVEVGCPNCVQSFACHEYNEVIHKDAAIMIIKGVMDAENLYIEGMC 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01119 1135 Pfam MrfA Zn-binding domain 1017 1099 IPR018973 -
Bva06g01119 1135 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 634 792 IPR001650 -
Bva06g01119 1135 CDD DEXHc_Hrq1-like 390 573 - -
Bva06g01119 1135 Pfam DEAD/DEAH box helicase 392 563 IPR011545 GO:0003676|GO:0005524
Bva06g01119 1135 SUPERFAMILY Ubiquitin-like 3 78 IPR029071 -
Bva06g01119 1135 SMART ultradead3 386 594 IPR014001 -
Bva06g01119 1135 CDD SF2_C_Hrq 594 758 - -
Bva06g01119 1135 ProSiteProfiles Ubiquitin domain profile. 7 78 IPR000626 GO:0005515
Bva06g01119 1135 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 398 581 IPR014001 -
Bva06g01119 1135 Gene3D - 627 802 IPR027417 -
Bva06g01119 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 756 IPR027417 -
Bva06g01119 1135 SMART helicmild6 668 749 IPR001650 -
Bva06g01119 1135 Gene3D - 358 578 IPR027417 -
Bva06g01119 1135 Pfam Helicase conserved C-terminal domain 643 747 IPR001650 -
Bva06g01119 1135 Gene3D - 8 98 - -
Bva06g01119 1135 CDD Ubl_ubiquitin_like 9 77 - -
Bva06g01119 1135 PANTHER ATP-DEPENDENT HELICASE HRQ1 20 1130 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01119 - - gmx:100819522 1487.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01119 06 8912639 8921789 Bva06g01119 06 8912639 8921789 ECH