Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01115 ATGCTAGTTGTAAATATGAATTCCAAAAGACAAAGGCGGCCAAATGTTAGATTAGGGGAAATAGGAGATATTTCTGCTGCTTTTGCATGTGGGTTTCCTCAGAAAACACAGGAAAAAAAGTTGGGGTCTAAGAGATGGAAACATGATGGTATGAATTCTAGGCAAATTGAACCCCATTACATCAATGGATTTTCTGAAGAAAGGTCTTCTCAGCACACGGATTCAGATCCTGGGGTGTCTCGTAGGAGTTCAGCAGACtttcaacataaaaaagagaatgagaacCCGAACTCATCAAAATCAGCGATTCATGTTGTAAAATCCAATGAATTGATTCTGACCAAGTCTAAATTGGATTTCAGCAATATAACTCGGAAGTGTAGGGTCATGAAACGACGAGGTCGCGGCGCAATAAATGATGGTGGTTTCTTTTGTGGTGGTTGGAATTCTAGACTTAGCCCTGAATTGAGTTGTGAAGAAGGGAGAGTGATCAGTTCTGGGAGGGATTCAGATAAATCCAATATCCAGTCAATTGATTATGGTTTTAAGGACTTGTCAGATCGTGAAACACCAGCAACCAGCAAAGAGGCATCTGAATCTTGGCAACAAGCAAATTCCCTGGACGTTTGGAAGGAGGATACTTGTGATGAATACAACACTGCTTTTCCTGGACCATGGGATGAGATTAGATGTGTGGGCAATGCTGTAGGTAGTGTTGAAAGATGGTTGAAAGAGCTGGGATTTGCTAAGTATGCTACTTTGTTCGAGATGCATGAAGTGGATGAAGAAGCACTGCCGCTACTTACTCTTGAAGATCTCAAAGAGATGGGTGTGTTTGCTGTTGGCTCACGACGCAAGCTGTACACCGCAATCCAACAGTTAAGAGTGGAAAGACACAAGGCCATAGTGTA 911 0.4138 MLVVNMNSKRQRRPNVRLGEIGDISAAFACGFPQKTQEKKLGSKRWKHDGMNSRQIEPHYINGFSEERSSQHTDSDPGVSRRSSADFQHKKENENPNSSKSAIHVVKSNELILTKSKLDFSNITRKCRVMKRRGRGAINDGGFFCGGWNSRLSPELSCEEGRVISSGRDSDKSNIQSIDYGFKDLSDRETPATSKEASESWQQANSLDVWKEDTCDEYNTAFPGPWDEIRCVGNAVGSVERWLKELGFAKYATLFEMHEVDEEALPLLTLEDLKEMGVFAVGSRRKLYTAIQQLRVERHKAIV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01115 303 ProSiteProfiles SAM domain profile. 234 297 IPR001660 GO:0005515
Bva06g01115 303 PANTHER STERILE ALPHA MOTIF/POINTED DOMAIN-CONTAINING PROTEIN-RELATED 1 298 - -
Bva06g01115 303 MobiDBLite consensus disorder prediction 61 102 - -
Bva06g01115 303 MobiDBLite consensus disorder prediction 83 97 - -
Bva06g01115 303 SUPERFAMILY SAM/Pointed domain 235 298 IPR013761 -
Bva06g01115 303 PANTHER SCP160 1 298 - -
Bva06g01115 303 Pfam SAM domain (Sterile alpha motif) 234 295 IPR001660 GO:0005515
Bva06g01115 303 CDD SAM_superfamily 238 292 - -
Bva06g01115 303 Gene3D - 239 297 IPR013761 -
Bva06g01115 303 SMART SAM_4 231 297 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01115 Bva-Chr6 8892601 8894244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01115 234 291 Glycosyltransferase AT3G07170 41.379 4.36e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01115 - - qlo:115963773 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01115 06 8892601 8894244 Bva06g01115 06 8892601 8894244 ECH