Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01093 ATGCCAATGAACGTCAAATCTGTGGTTATCTACCTAGCCATCGCTCTGGCAGGTTATGTTGTTGTATCGATTGCTGATAGTTTTGCAGCGCCTGAAATATCAACCAGgcttaaaatatcaaaagcaaAACTCATATTTACTCAGGATTTTGTTATTCGTGGTAACAAAAGCCTCCCCTTGTACAGTAGAGTTGTGAATGCACAGTCGCCTAAGGCAGTTGTTATCCCTACCAGAGGCTCTGGGTTTAGCATGAAATTGCGCAGTGGTGACCTTTCTTGGCATGATTTCCTGGAGGGAGTCAATAATCTCAAAGGCAGGGAATTCATAGCTGTAGAACGGCCAGTAGAAGCATTTACAaacattctcttttcttctggaacaacagGTGATCCAAAGGCAATTCCGTGGACTAATGTAACTCCTCTAAGAGCTGCTGTAGATGCATGGTGCCACTCGTCCATTGGTAAAGGTGATGTAATGGCCTGGCCTACTAATCTTGGATGGATGATGGGTCCTTGGCTAGTATATGCTTCTTTCTTAAATGGAGCTTCAATGGCTTTATATGATGGATCCCCTCTTGGGTCTGGCTTTGCCAAGTTTGTACAGGATGCGAAAGTAACAATGCTTGGCGTGATCCCTAGTCTTGTTCGGGCTTGGAAAAGCATGAATTCCACAGTTGGCTATGATTGGTCTGCTATCCGTTCTTTTAGTTCCACCGGAGAAACATCTAGTGTAGATGAATGCCTTTGGCTGATGGGAAGAGCTAACTACAAACCCGTTATTGAATACTGCGGCGGTACTGAGATAGGTGGTGCATTTATTGGTGGATCATTACTGCAGGCTCAGTCATTGAGTGCTTTCAGCACACCTGCTATGGGCTGCAGTTTATTTATTCTTGGTGATGATGGCTATCCTATTCCAGAAAATGTTGCTGGAATAGGTGAATTGGGAATGCCTATGTGGAATGGAAAGGTTTTGCGGAGGCATGGGGATGTATTTGAGCGTACTTCTAGAGGATACTATCATGCGCATGGTCGTGCAGATGATACAATGAACCTTGGAGGAATCAAGGTAAGTTCTGTTGAGATTGAACGCATCTGCAATGGAGTAGATAGCAGTATCCTAGAAACAGCTGCAATTGGTGTGCCACCCCTTGGAGGGGGCCCTGAGCTGTTGGCAGTAGTTGTTGTATTCAAGAATTCAAAAGGCACAGACTTGAATCAATTAATGGTTTCTTTCAATTCAGCTCTCCAGAAGACATTGAATCCATTATTCAGGGTTTCTCGTGTGGTGCCACTGTCAGCTCTTCCAAGGACGGCGACAAATAAAGTTATGAGAAGGGTTTTGCGGAAGCAGTTAGCTCAAAGTAACCAAGTTTCCAAGCTATA 1388 0.4308 MPMNVKSVVIYLAIALAGYVVVSIADSFAAPEISTRLKISKAKLIFTQDFVIRGNKSLPLYSRVVNAQSPKAVVIPTRGSGFSMKLRSGDLSWHDFLEGVNNLKGREFIAVERPVEAFTNILFSSGTTGDPKAIPWTNVTPLRAAVDAWCHSSIGKGDVMAWPTNLGWMMGPWLVYASFLNGASMALYDGSPLGSGFAKFVQDAKVTMLGVIPSLVRAWKSMNSTVGYDWSAIRSFSSTGETSSVDECLWLMGRANYKPVIEYCGGTEIGGAFIGGSLLQAQSLSAFSTPAMGCSLFILGDDGYPIPENVAGIGELGMPMWNGKVLRRHGDVFERTSRGYYHAHGRADDTMNLGGIKVSSVEIERICNGVDSSILETAAIGVPPLGGGPELLAVVVVFKNSKGTDLNQLMVSFNSALQKTLNPLFRVSRVVPLSALPRTATNKVMRRVLRKQLAQSNQVSKL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01093 462 Gene3D - 349 462 IPR045851 -
Bva06g01093 462 Pfam AMP-binding enzyme 1 315 IPR000873 -
Bva06g01093 462 ProSitePatterns Putative AMP-binding domain signature. 121 132 IPR020845 -
Bva06g01093 462 Gene3D - 1 348 IPR042099 -
Bva06g01093 462 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 1 317 - -
Bva06g01093 462 SUPERFAMILY Acetyl-CoA synthetase-like 1 455 - -
Bva06g01093 462 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 317 462 - -
Bva06g01093 462 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 317 462 - -
Bva06g01093 462 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01093 Bva-Chr6 8782066 8786616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01093 1 456 Acyl Lipid Metabolism Gene Families AT1G55320 51.553 1.19e-177 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01093 - - gmx:100779628 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01093 06 8782066 8786616 Bva06g01093 06 8782066 8786616 ECH