Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01080 ATGGCGGAAGATGCTGAGAAAAGGTTCCATTCGATCATTGACAAGCTCTTTCATGTTCCCAAATCAGTACCGTATTCTTCCAGTTCATCTCGAGTACAAGTATCTGGAGGTAGAAAACGTCCGTACACAGTTGCATTAGGGGTAACAGAATCAAATTTGGGAGGTGATGTTTCCGGGGGACAGCAGCCCTCATCAACTTCAGCTGGGTCACCGCAGGGACCACTCTGCAGACCGTGGGATCGTGGTGACTTCATGAGAAGATTAGCAACATTCAAATCTATGTCGTGGTTTGCTAAACCCAAGGTTGTGAATGCAGTAAATTGTGCTAGAAGAGGTTGGATTAATGTGGATGTGGATACCATAGCCTGTGAAGAATGTGGGACTCGTCTCCTTTTCTCTACGCCAGCATCTTGGAATCAGCAGCAAGTGGAGAAGGCAGCCTTGGTCCTTAGCTTGAAGCTTGATAATGGACATAAATTACTTTGTCCATGGATCAACAATGCCTGTGATGAAACAGTGGCACAATTTCCTCCTACATCTCCTCCAGTCTTAATTGCTGATTTTAAAAGACGTTGTTCTGCTCTCTTGCAACTGTCAGCTCTTCCTAGAATTTTATCTTCAGCAATAGAATGCATGAAAAGCTCAATGCTGGAAGAATTTCTTAGAGAATCTTCCATGCTGGAGTGTGGAAATGGATCTGCCAACAATTTTGAGACCGTAAGCATCAGCAATCAACATGAAACCAAATTGTATTATCAGgCTCTAAAGCTTATAAGTTTATGCGGTTGGAAACCTCGTCCACGTCCTTACCTTGTTGATTGCAAGGATGGATCAGATCAGTCTGTTAAAAGCACAAGTATTCTAGATCCATCTCGAGTAGTTACTGATATAAAGAATAATAGCTCCATTGTCCCCTCTTCTAGTACAGATGAAGATCTGAAAACAGATGAAAAGTATGAGGATTCTAGTGGAGAACAAATCGATCCCAACTCTGTAGTTTTAGATTGTAGTCTATGTGGAGCTGTTGTTGGGTTATGGGCATTCTGTATGATTCCTCGGCCTGTTGAGTTATTAAGATTAGTTGGGCATACAGAAGTGAATGGTGAAAATGATTCTGGGATCCACAGCTCATTTGATAAATGTGATCATGAAAGTAGGCAAGGTGTGACCAATAACGTGTTGGATGTTGCAACTTCATCGAAGAATGAATCTTCTAGTCTGAAAATGACAATTGCAGGGGGTCCTCCGCCaacaaagcaaaattttaaagcaaCAATATCTTTACCCGTTATCGGTCAGAACTTGAGGGCCAGGATTTCTTATGACTCTGATTTTAGAGATCGTGTTATCAATGGAGATGGTGTTCAGACTATTGGACGAATTGTTCCTACGACCTCTGCTTTAGTTGTAGATGATGTTATAAAGAGCATGAAGAGTGCAGGACAGCCTTCAAGTCGTGAGATGCTTATACATACAGAGGCTGATGATGAAAACAGTGCAGCTCTAGGAGACCCTAGTAGTTCTCAGAAAAACATGACAGAAGATAAAGCACTTTCTGTTGCACAGAAGAATTTGAATGGACAAGTTAGTAGTCTTGAGAATTGTGGGGTCAAAGACACCGTAGAGAAACCTGTAAGTTTAGGAAAGGATCTGAGACAGGTACTTCCTGACAAAGCAATGGAGTTTGATCCAAGCAGGCAACACAGACACTTCTGCCCCTGGATTGCATCACCAGATGACGGGGAACCTGGATGGCGACGAACATTATCTGCTCTATAtaatcagaaaaataatttgcacTCTTCACCAAATAGATCTCCTTCATCCATGTCAATTCTTAAGGTGGATGACCCTATCGGTTCAGTTAGAAATCTTTTCATGTCTCCATCTACCAAGAGATTGAAGCCGACTCGCATTTCAGACCGAAGTACTGAGGGTGGGTA 1943 0.4164 MAEDAEKRFHSIIDKLFHVPKSVPYSSSSSRVQVSGGRKRPYTVALGVTESNLGGDVSGGQQPSSTSAGSPQGPLCRPWDRGDFMRRLATFKSMSWFAKPKVVNAVNCARRGWINVDVDTIACEECGTRLLFSTPASWNQQQVEKAALVLSLKLDNGHKLLCPWINNACDETVAQFPPTSPPVLIADFKRRCSALLQLSALPRILSSAIECMKSSMLEEFLRESSMLECGNGSANNFETVSISNQHETKLYYQALKLISLCGWKPRPRPYLVDCKDGSDQSVKSTSILDPSRVVTDIKNNSSIVPSSSTDEDLKTDEKYEDSSGEQIDPNSVVLDCSLCGAVVGLWAFCMIPRPVELLRLVGHTEVNGENDSGIHSSFDKCDHESRQGVTNNVLDVATSSKNESSSLKMTIAGGPPPTKQNFKATISLPVIGQNLRARISYDSDFRDRVINGDGVQTIGRIVPTTSALVVDDVIKSMKSAGQPSSREMLIHTEADDENSAALGDPSSSQKNMTEDKALSVAQKNLNGQVSSLENCGVKDTVEKPVSLGKDLRQVLPDKAMEFDPSRQHRHFCPWIASPDDGEPGWRRTLSALYNQKNNLHSSPNRSPSSMSILKVDDPIGSVRNLFMSPSTKRLKPTRISDRSTEGG 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01080 647 MobiDBLite consensus disorder prediction 310 324 - -
Bva06g01080 647 MobiDBLite consensus disorder prediction 299 326 - -
Bva06g01080 647 MobiDBLite consensus disorder prediction 53 77 - -
Bva06g01080 647 MobiDBLite consensus disorder prediction 624 647 - -
Bva06g01080 647 Pfam C3HC zinc finger-like 78 200 IPR012935 GO:0008270
Bva06g01080 647 MobiDBLite consensus disorder prediction 54 72 - -
Bva06g01080 647 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01080 Bva-Chr6 8718057 8722708 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01080 - - gmx:100799942 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01080 06 8718057 8722708 Bva06g01080 06 8718057 8722708 ECH