Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01079 ATGCTACAAAGCCTGAAACCATTTCGAGCTTCTCCTCAACCATTCAATCCTCCAACTCAAAAGACGACACCGTTTCCTTTACCATTTCAATTAGTACCCATTTCTTCCTCTTATCCCACCCTCAAGCGCCAATGCAGATTTTCTCGTCGAGAGCTCGCAATTTACAGCAACTCTTGCCTGCTGCTTCTTCTGGGCGCACAGGCATTGGATCCATCCACAGCAAGAGCAGAGGAAGAACGAGAAAACCTCACAGATTCAATCAAAATTGATCAACCAGAAGAGAATTTGACTTCCACTAACAGTGATCAACCAGCTGAAGAGACTTTGGCTACTGCTGAAAGTGATCAATCCGAAGAGAATTTGACTACCAACGACAGTGTGCAGCCAGAAGAGACTTCGGCTACTGCTAAAAGTGATCAATCCGAAGAGAATTTGACTTCTACCGACAATGATCAACCAGAAGAGACTTCAGTTACTACTAAAAGTGATGAACCAGAAGAGAATTCGACTACCAATGTCGGTTGCAGCGAAAGAAAACCCACCCAACAAGTATTCTTTGACATTTCCATTGACGGTGAACCTGCTGGTCGCATTACCATTGGGCTATTTAGAAATGATATTCCTGCAGCTGTTGACAGGTTCACTAAGCTTGTGAGTGGGGCTGCTGGTATAAGCTACAGAAGAAAAGAGTTCGTCAAAATCATGCCCAATTACGTTCAACACGGTGGGATTAGATCCTATGGCGTGGATGCTGAACTTGCACAGAGGGCAGGAGGcaattttgtcaaagataGCCTTGTCGAAGAGTGGGAGAGAACGAGTGAGAAATGCCCTGGGACCAAAAATGTGGCTGGAAGCGTAGGCATTATTGTGAGAGATCCAACAAAACCACCTCCTAAGTTGAAACTAGTTGCAAAGAGAGGGAAGCTAGAGATTGATCAAGAAGAGATTGGAACTGATCCCAATGGGACAGAATTTGTCATCACCACAAAGGATTCGCCAGAATTGGATGCGTCAACGCTAGTAATTGGAAGAGTAATAGGAGGGATGGATGTTGTGCAGAGGATTGGTCAGGTGAAAACTGTTCAAGAGAATACAGGCTCTCCTTATTTTAGGGTCGCAAAGCTGATAGGAGACAAGAGAGCTGTAGTAGCAGAACGAGGTTTCAACCGCCCTTATTCAAAAGTTATTGTCACAAACTGCGGTGTAATTCAGTA 1217 0.4412 MLQSLKPFRASPQPFNPPTQKTTPFPLPFQLVPISSSYPTLKRQCRFSRRELAIYSNSCLLLLLGAQALDPSTARAEEERENLTDSIKIDQPEENLTSTNSDQPAEETLATAESDQSEENLTTNDSVQPEETSATAKSDQSEENLTSTDNDQPEETSVTTKSDEPEENSTTNVGCSERKPTQQVFFDISIDGEPAGRITIGLFRNDIPAAVDRFTKLVSGAAGISYRRKEFVKIMPNYVQHGGIRSYGVDAELAQRAGGNFVKDSLVEEWERTSEKCPGTKNVAGSVGIIVRDPTKPPPKLKLVAKRGKLEIDQEEIGTDPNGTEFVITTKDSPELDASTLVIGRVIGGMDVVQRIGQVKTVQENTGSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCGVIQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01079 405 MobiDBLite consensus disorder prediction 1 24 - -
Bva06g01079 405 MobiDBLite consensus disorder prediction 89 155 - -
Bva06g01079 405 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 3 405 IPR044185 -
Bva06g01079 405 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 186 364 IPR002130 GO:0000413|GO:0003755
Bva06g01079 405 MobiDBLite consensus disorder prediction 74 178 - -
Bva06g01079 405 Gene3D - 172 405 IPR029000 -
Bva06g01079 405 SUPERFAMILY Cyclophilin-like 181 404 IPR029000 -
Bva06g01079 405 MobiDBLite consensus disorder prediction 74 88 - -
Bva06g01079 405 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 185 403 IPR002130 GO:0000413|GO:0003755
Bva06g01079 405 MobiDBLite consensus disorder prediction 163 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01079 Bva-Chr6 8716615 8718613 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01079 K03768 - gmx:100800469 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01079 06 8716615 8718613 Bva06g01079 06 8716615 8718613 ECH