Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01064 ATGGCGCAGGAAAAGTCACCAGATTGTAACTACCTAATGCTTTTGCTGTTTGTCTTCTTTGCTATGGCCTCAAGTGGTTGTGGTGTTGGAGTGAACTGGGGAACCCAGACATCCCACCAGCTTCCACAAGAGAAGGTGGTTAAGATGCTTAAAGAAAATGGGTTTAGTAAAGTGAAGCTGTTCGATGCAGATGAGTGGATCATGGCAGCTCTTATGGGGAGTGACATTGAATTGATGCTAGCAATACCCAATAGCATGTTGGAGGAGATGGGCAAGAATCATAAGGCTGCAGATGCTTGGGTCTACGAAAATGTCACCGGTTACAGCTATAATGGCGGAGTCAATATCAAGTACGTTGCAGTGGGTAATGAACCATTCCTTAAGGCATATAATGATACCTATCTAAAGTCAACTCTCCCAGCTCTTAAGAACATACAAACATCACTCAATAAAGCTGGTCTGGGCGCTAAGGTGAAGGTCACTGTTCCCTTCAATGCTGACGTTTACTATTCTCCAGAATCAAATCCAGTGCCAACAGCTGGCGACTTCAGGCCTGATATACGAGACCTCATAATTGAAATAGTCCAATTCCTATATTCTAACAGTGCACCCTTTTCAGTCAATATCTATCCATTTCTTAGTCTATATGGCAACGAGCATTTCCCCTTTGACTATGCATTTTTTGATGGAAATAACAGGCCACTGAGAGACGGTAATTCTCTTTACACCAACGTGTTTGATGCAAATTTCGACACTCTTCTTTGGGCTTTAGACAAGGCAGGGTACCCTGACATGCAGATCATAGTTGGAGAAGTTGGGTGGCCAACAGATGGTGATATGGCTGCTACTGTTCAGAATGCAAAGAGATTCAACCAGGGTTTACTTAAACATACTCTGAGTGGAGATGGTACCCCAAAAAGGAAAGGTATAATTGACTTTTATCTATTTAGCCTCATTGATGAGGATGCCAAGAGTGTTGCTCCTGGCAATTTTGAGAGGCACTGGGGGATTTTTGAGTTTGATGGAAAGCCAAAATATGAATTAGACTTAAAAGGTCATGGGAAGGATAAGGGTCTGACCCCTGTGGAAGGTGTAAAATATATGCTCAAGCAATGGTGTGCTTTGGACCCAGATGCCACTGCTAGTGATCTGGAGGACTTGCCTGAGAGTATAGACTATGCTTGCAGCCTATCTGACTGCACTGCCCTGGGATATGGATCATCTTGTAATAATCTAAGTTGGAGAGGAAATGCATCTTATGCCTTCAATATGTATTATCAAGTACATGGCCAAAGGGATTGGGACTGTGATTTCTCTGGTTTGGCTACCGTAACAGATAAGGATCCATCAGAAGAGGGTTGCCAGTTCCCAGTGATGATTGCTGGTTCTTCTTCGCTGCTGCATATTGGATTTTCGAATGCGCTAAGAAAAGCTGCGGGATTATGTATGGTTGTTCTGTTTTTGCTATATTGCTG 1475 0.4319 MAQEKSPDCNYLMLLLFVFFAMASSGCGVGVNWGTQTSHQLPQEKVVKMLKENGFSKVKLFDADEWIMAALMGSDIELMLAIPNSMLEEMGKNHKAADAWVYENVTGYSYNGGVNIKYVAVGNEPFLKAYNDTYLKSTLPALKNIQTSLNKAGLGAKVKVTVPFNADVYYSPESNPVPTAGDFRPDIRDLIIEIVQFLYSNSAPFSVNIYPFLSLYGNEHFPFDYAFFDGNNRPLRDGNSLYTNVFDANFDTLLWALDKAGYPDMQIIVGEVGWPTDGDMAATVQNAKRFNQGLLKHTLSGDGTPKRKGIIDFYLFSLIDEDAKSVAPGNFERHWGIFEFDGKPKYELDLKGHGKDKGLTPVEGVKYMLKQWCALDPDATASDLEDLPESIDYACSLSDCTALGYGSSCNNLSWRGNASYAFNMYYQVHGQRDWDCDFSGLATVTDKDPSEEGCQFPVMIAGSSSLLHIGFSNALRKAAGLCMVVLFLLYC 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01064 491 Pfam Glycosyl hydrolases family 17 29 349 IPR000490 GO:0004553|GO:0005975
Bva06g01064 491 Pfam X8 domain 371 443 IPR012946 -
Bva06g01064 491 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Bva06g01064 491 Gene3D Glycosidases 28 357 - -
Bva06g01064 491 ProSitePatterns Glycosyl hydrolases family 17 signature. 265 278 IPR000490 GO:0004553|GO:0005975
Bva06g01064 491 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 13 472 - -
Bva06g01064 491 SUPERFAMILY (Trans)glycosidases 29 349 IPR017853 -
Bva06g01064 491 Gene3D - 367 461 - -
Bva06g01064 491 SMART X8_cls 371 456 IPR012946 -
Bva06g01064 491 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 472 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01064 Bva-Chr6 8631808 8633934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01064 28 461 Miscellaneous Gene Families AT2G19440 59.908 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01064 - - gmx:100802345 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01064 06 8631808 8633934 Bva06g01064 06 8631808 8633934 ECH