Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01058 ATGGTCAAGAATTTCAAAGCAGAGCTCGGAACTTGGAACTTTGAACGCGAGGCGGGAGTGCCAGCTCGTCGCCCTTTTCGTCCCTTCGCCTGCATTTCCTCGTCTGATCTAGGCCTAAAGGCCCCTAACCGTTGCCTCTTGCTTGGTTGCCGAAATAGTACGGCCCTTAAATTCATTATGGTGGCAACTGCTGCTACTTCTGCATTTCTCCCTGTTGCTTCATCCTCACCAGACACCGGTGCAAAGGCCACCAAAGTTGGTGGTGGGTCTGCTAACCTTGGAGGATCCAAATTGAATCCTGCTTCTTCTCGTGGCTTGCAAGTTAAGGCAAATGCCCAAGCCCCTCCCAAGATTAATGGAACTTCCGTTGTTAAACCTGTTGAAGGCGTGAAGCATGATGATGTTTTGCCTTCATCTGTGGCATCTGCCCCAAGGACTTTCATCAACCAGTTACCTGATTGGAGCATGCTACTTGCTGCTATAACAACAATTTTCTTGGCAGCAGAGAAGCAGTGGATGATGCTTGATTGGAAGCCAAGGCGATCAGACATGCTTATTGACCCATTTGGAATAGGGAAAATCGTTCAGGATGGTTTGGTTTTTCGGCAGAATTTTTCTATTAGATCATATGAAATAGGTGCTGATCGAACTGCATCTATAGAGACATTAATGAACCATTTACAGGAAACTGCACTTAATCATGTCAAGACTGCCGGGCTTCTTGGTGATGGTTTTGGTTCTACGCCAGAGATGTGCAAAAAGAACCTGATATGGGTGGTTGCTAGGATGCAAGTTGTGGTTGATCGTTATCCTACATGGGGTGATGTTGTTCAAGTAGATACTTGGGTTTCGGCATCTGGAAAAAATGGTATGCGTCGTGATTGGCTTGTGCGTGACTGCAAAACTGGTGAAACCCTGACAAGAGCCTCCAGTGTCTGGGTCATGATGAATAAACTGACTAGGAAGCTATCTAAAATTCCGGAAGAAGTCAGAGGGGAGATAGAGTCATATTTTGTGGATTCTTGTCCTGTTGTGGATGAGGATAACAGAAAACTACCCAAACTTGATGACGATACAGCAGACTATATTCGCTCTGGTTTAACTCCTAAGTGGAGCGACTTAGATGTCAATCAACATGTTAACAATGTGAAGTACATTGGCTGGATCCTGGAGAGTGCTCCACAGTCCATCTTGGAGAGTCATGAACTTGTTTCCATGACTTTGGAGTATAGGAGGGAGTGCGGTAGAGACAGTGTGCTGCAGTCTCTGACTGCTGTCTCTGGTGCTGATGTTGGCGATTTAACTCACAGCGGACAAGTGGAGTGCAAGCATTTGCTTCGACTCGAGGATGGCGCTGAGATTGTGAGGGGTAGGACTGAGTGGAGACCCAAACAAGCCAACAACTTTGGTGTTGTGAACCTGGTTCCAGCAGAAAGCACCTA 1442 0.466 MVKNFKAELGTWNFEREAGVPARRPFRPFACISSSDLGLKAPNRCLLLGCRNSTALKFIMVATAATSAFLPVASSSPDTGAKATKVGGGSANLGGSKLNPASSRGLQVKANAQAPPKINGTSVVKPVEGVKHDDVLPSSVASAPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLIDPFGIGKIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVARMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCKTGETLTRASSVWVMMNKLTRKLSKIPEEVRGEIESYFVDSCPVVDEDNRKLPKLDDDTADYIRSGLTPKWSDLDVNQHVNNVKYIGWILESAPQSILESHELVSMTLEYRRECGRDSVLQSLTAVSGADVGDLTHSGQVECKHLLRLEDGAEIVRGRTEWRPKQANNFGVVNLVPAEST 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01058 480 Pfam Acyl-ATP thioesterase 60 187 IPR021113 GO:0016790
Bva06g01058 480 CDD 4HBT 201 317 - -
Bva06g01058 480 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 60 467 IPR045023 GO:0006633|GO:0016297
Bva06g01058 480 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 195 346 IPR029069 -
Bva06g01058 480 Gene3D Hotdog Thioesterase 191 468 - -
Bva06g01058 480 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 353 462 IPR029069 -
Bva06g01058 480 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 60 467 - -
Bva06g01058 480 Pfam Acyl-ACP thioesterase 198 462 IPR002864 GO:0006633|GO:0016790
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01058 Bva-Chr6 8596129 8600564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01058 60 464 Acyl Lipid Metabolism Gene Families AT1G08510 79.115 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01058 K10781 - gmx:100170693 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01058 06 8596129 8600564 Bva06g01058 06 8596129 8600564 ECH