Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00994 ATGATCTCTCCCAAGCAGCTCCTATCCACCTTGGAATCGGAGCTTCTCGGCCCATCGCCTCCGACGATGGCGCATAGGGTCGAGCTCTTGCATGCTATTCGCAGTTCCCTTCCTTCCTTTAAGTCCCTCCTTTCCTATCCGCGTCCAAAATCCTCTGACCGCAGTCAAGTCCAGTCAAAGCTAGTTAGAACTCCAGATGGTTCACCTGTTTCTCTCGACGATCAAGATGTCCAGCTTGTGCTCAAATTGAGTGATGACCTCCACCTCAATGAGATAGATTGTGTAAGCTTGCTTATTTCTACTAATCAAGAGTGGGTTTTAATGGGAAGGGAACCACTGGAAATTGTACGCCTTGCAGCTGGGCTTTGGTACACCCAAAGAAGAGATCTAATAACATCACTCCACTTGCTGTTAAGAGCTGTGGTGCTAGATCAGGGACTTGAAGATGATATATTGGCTGACATTCAGAAATATCTGGAAGATCTTATAAATTCTGGACTTAGGCAGCGATTGATTTCTCTTATCAAGGAACTCAATAGAGAAGAACCTTCTGGTTTGGGTGGTCCTCTCTGTGAGCAATATATTCTTGATTCAAGAGGTTCTCTTGTGGAGCGGCGAGCTGTGGTGTCTAGAGAAAGGCTCATACTTGGACATTGTTTAGTCCTTTCTGTTTTAATTGTTCGGGCAAGTCCAAAGGatgtaaaagatattttttctgCTCTAAAAGATAGTGCTACAGAAGTTAGTGAGAGTGATACCACCTTAAAACATCAGATTACCTTTAGTCTTCTGTTTTCACTTGTGATCGCATTTGTCTCTGATGGATTAAGTACAGTGCCGGATAAAGCATCTATTCTATCCTCTGATGCTTCCTTTAGACGTGAATTTCATGAAATTGTTATGGCTACTGGAAATGATCCAGTTGTTGAGGGCTTTGTTGGTGGTATAAGGCTTGCTTGGGTAGTGCATTTGATGTTAATACAAGAAGCTGCTGCCACAAGGGAGACTGGTTCTAGTGGTTCATCGAATGAAATGGGTTATCTTAATCAGTGCTTGGAGATCATTTTCTCAGAGAATGTGTTCCAGTTTTTATTGGATAAAGTTCTTCGAACTGCAGCTTACCAGaatgatgatgaagatatgATCTATATGTACAATGCTTATCTGCACAAGCTGATGACCTGCTTCTTGTCTAACCCATTTGCTAGAGACAAGATAAAAGAATCTAAAGAGAGGGCTATGAGTGTGCTTAGTCCATATCGTATAGCTGGATCGCATGAGTTTGTGCAAGATAATAGCTCAAGTTCTCTACATGGCACTGAAATTGGTTGTTTACCATTTATTTCTGTCCTGGAGTTTGTCAGTGAAATTTATCAGAAAGAACCAGAGCTCTTATCTGGCAATGATGTGTTGTGGACCTTTGTGAATTTTGCTGGAGAGGACcatacaaattttcaaacactTGTAGCTTTCTTGAACATGCTGAGCACCTTGGCTTCTAGTCAAGAAGGTGCATCCAAGGTTTTTGAGTTACTTCAGGGTAAAGCATTCCGCTCTATTGGATGGAGCACTTTGTTTGAATGTTTAACAATATatgatgagaaatttaaaCAAGCCCTTCAAACTGCTGGAGCAATGTTGCCTGAAATTCAGGAAGGGGATGCCAAAGCACTTGTGGCATACTTAAATGTTCTTCAGAAGGTTGTGGAAAATGGGAACCCCGCAGAAAGGAAAAACTGGTTTCCTGATATTGAGCCATTGTTCAAGCTTCTTAGTTATGAAAATGTGCCTCCTTATCTGAAGGGTGCTCTAAGGAATGCAGTAACCACATTTGTTCGTATCTCTCCAGTTTTGAAGGATAGCATTTGGGCATATCTTGAGCAATATGATCTACCTGTTGTTGTTGGGCCCCATGTCCAGAATGGTCCACAGCCCTTGGCTACTCAGGTATATGATATgcaatttgaattaaatgaaatagaagcaAGGAGAGAGCAGTATCCTTCAACTATATCCTTCCTCAATCTGTTAAATACTCTTATTGCTGAAGAAAGAGATCTGAGTGATAGAGGCCGAAGATTTATTGGCATCTTTAGATTCATCTATGATCATGTTTTTGGGCCATTTCCTCAAAGGGCCTATGCTGATCCCTGTGAAAAGTGGCAGTTGGTTGGTGCCTGCCTCAAACATTTCCACATGATGCTTAGCATGTATGACATCAAAGATGAGGACATTGATGGTGTAGGTGATCAATCTCGTCTTTCATCAGCCAAAGAATCATCACCTCTTCAGACACAGCTTCCTGTACTAGAGTTGCTAAAAGATTTCATGAGTGGCAAGACTGCTTTTCGGAACATCATGGGCATTCTTCTGCCTGGGGTGAATTCCATCATTACTGAAAGGAGTAGTCAATTATATGGGCAGCTTTTAGAGAATGCTGTGCAGCTTTCTTTGGAAATTATAATTCTTGTTCTTGAAAAAGATTTACTTCTTTCTGATTATTGGCGACCTTTATACCAGCCTTTGGATATTATACTCTCGCAAGATCATAATCAAATAGTGGCTCTTTTGGAGTATGTCAGATATGATTTTCAGCCAAAAATTCAACAAGCCTCTATCAAAATCATGAGTATTTTAAGCTCTCGCATGGCTGGGCTTGTTCAATTATTGCTGAAATCTAATGCTGCAAACAGCCTGATAGAAGATTATGCAGCCTGTCTTGAGTTGCGGTCTGAAGAGTCTCAGATTATAGAAAACAGTAATGAAGATCCAGGCATCCTTATTATGCAACTTCTAATTGACAATATCAGCAGACCAGCTCCAAATATTGCACATTTACtacttaaatttgatttagaCACACCTGTTGAGAGGACAGTTTTACAGCCTAAATTTCATTACAGCTGCATGAAGGTTATCCTTGATATCCTGGAGAAGCTATTGAAACCTGATATGAATGCATTGCTTCATGAATTTGGTTTTCAGCTCCTTTATAATTTGTGCGTAGATCCTCTGACATGTGATCCTACAATGGATCTGTTGTCAAGTAAGAAGTATCAATTCTTTGTTAAGCATCTTGATACAATTGGGATTGCTCCACTTCCTAAGCGAAAAAGCAATCAGACGCTGCGTATCAGTTCTCTTCATCAGAGAGCATGGCTGTTGAAACTTTTAGCTGTTGAGCTACATGCTGGTGACGTTAGCAGCTCCAATCACAGAGAAGCATGCCAGAAAAtactttcttatctttttggACAAGTTATTGACGaaacatcttcatcttctctaACAAATAGTGCTGAAAATGCTCTCATGAGAACTGTCAGTAAGAGTAAGGTGTTGGAATTGCttgaaattattcaatttcGATCTCCAGATACAACTTCTAAGCTCTCGAATGTTTTGGCTAGTATGAAGTATGACTTGCTGGCAGAAGACATACTTGGTAATCCTGCAAGTTCTGGAAAGGGTGGTGTCTACTTCTATTCTGAGCGTGGTGACCGGCTCATTGATTTGACTTCCTTCCATGACAAGCTTTGGCAGaaaTATAATTCTGCTTATCCTCAAGTGAGTAACCTTACTGGTGAAGTTGAGTTAAATGATATAAGAGAGACAATTCAACAGTTGCTGCGATGGGGGTGGAAATACAATAAGAATCTTGAGGAGCAGGCTGCACAACTCCATATGTTGACTGCCTGGTCTCAGATTGTTGAgGTCTCTGTGTCGAGAAGAATAACAATGCTTGAAGATCGAACTGAAATTCTATTTCAGGTTCTTGATGCAGCTCTTAGTGCTTCTGCTTCTCCAGACTGTTCTTTGAAGATGGCTTTTATATTATCCCTGGTAGCACTGACGTGCATGGCTAAACTGCGGGATGAAAGGTTTTCGTTCCCAGGCAGTCTGAATTCAGATAGTATCACGTGTTTTGATCTAATTTTGGTTAGACAGTTATCAAATGGTGCTTGTTTGACCATATTGTTTAAGCTTACCATGGCAATTCTTAGACATGAATCATCTGAAGCTTTAAGGAGACGTCAATATGCCTTGCTTCTTAGCTATTTCCAGTATTGCCGAAATGTGGTTGATCCAGATGTTCCGACCACTGTTCTTCAGTTTTTGATGCTCAACGAACAAGATAATGAATATATTGATCTCCCAAAGATTGACAAAGAACAGACAGAGCTGGCTCGTGCAAATTTTTCCACTTTGAGGAAAGAAGCTCAGAGAATCCTTGATTTGGTCATAAAAGATGCCACCCAAGGCAGTGAACCTGGAAAGACAATATCACTCTATGTTTTGGAGGCATTGGTTTGTATAGATcatgataaatatttcttgAACCAGCTTCAAAGCAGGGGATTTTTAAGGTCTTGCTTTGCGAGCATAAGCAATGTTTCCAACCAGGATGGTGGGCATTCACTGGACTCTTTGCAGCGTGCCTGTACTTTTGAGGCCGAACTTACTTTACTACTAAGAATTGGCCACAAGTATGGGAAATCAGGAGGGCAGGTGTTATTTTCCATGGGCATTTTAGAGCACCTTGCTTCTTGCAGGGCAATCAATGTCCCAGGAAGTTTTAGAAGGATTGAGACAAGACTTCGGAGAGATATGGCCGTGGATGTTGACAGACAAAGAATGATTGTAGCTCCAGTTTTGAGATTAGTCTTTTCATTAACATCATTGGTGGATGCATCAGAATTTTTTGAGgtgaagaataaaattgtccGTGAAGTAATTGATTTTGTCAAAGGGCATCAATCGCTTTTTGACCAAGTTCTCCGGATAGACATTACCGAAGCAGATGAACTGAAAATGGAGCAGATCAATCTTGTTGTTGGTATCCTTAGCAAGgTTTGGCCATATGAAGAGAGTGATGAGTATGGTTTTGTGCAAGGGCTCTTTGGAATGATGCATGCCCTTTTCTCTCGTGATTTAGAGGCTCCTAGTTTTGCTCTATCAATATTATCAGCTGAGAGTCAAAGGAACTCGGAACTACAAATGTTTCGCTTATGCTTCAGCCTGAGCTCTTACTTATATTTTCTAGTCACAAAGAAATCCCTAAGATTGCAGATTTTAGATGCTTCCTCCAGTTACTCTACTTCCATTGAACTTCAACAGCCTACATTGAGCTTGCTTAATTCTCTCCTCACTTCAGTTACAACTGCTCTTGAAAGGGCAGCTGAGGAGAAATCTTTGCTACTGAATAAGATTCGAGACGTAAATGAACTATCAAGGCAAGAGATAGATGAAATCATCAATATGTGCGTTAGGCAAGATTATGTTTCATCTTCGGACAGCATACAAAAAAGGAGATACATTGGCATGGTGGAAATGTGTCGAGTTGTTGGTAGCAGGGACCAGCTCGTATCTTTGTTACTCCCACTTTCCGAACATGTGCTGAACATTTTCCTGATCCATCTCCAGGAGTGCTCTGGTGTATCTGATGCAACCTCAACAGTAAAATCAATTGCATTTCGTTCGAAGCCTGATCCAGAACAGGATATTGCATCGTTGTGCGGAAAGCTAGTTCCCACCCTGGAACGACTCGAGTTACTGAGTGAGGAGAAAGTAGGGCACAATCTCAAGGTGTTCAGAAGATTAGCAACTTCTGTTAAAGAGATTGCAATTAGAAAGTTGGTTCTGTA 5645 0.3984 MISPKQLLSTLESELLGPSPPTMAHRVELLHAIRSSLPSFKSLLSYPRPKSSDRSQVQSKLVRTPDGSPVSLDDQDVQLVLKLSDDLHLNEIDCVSLLISTNQEWVLMGREPLEIVRLAAGLWYTQRRDLITSLHLLLRAVVLDQGLEDDILADIQKYLEDLINSGLRQRLISLIKELNREEPSGLGGPLCEQYILDSRGSLVERRAVVSRERLILGHCLVLSVLIVRASPKDVKDIFSALKDSATEVSESDTTLKHQITFSLLFSLVIAFVSDGLSTVPDKASILSSDASFRREFHEIVMATGNDPVVEGFVGGIRLAWVVHLMLIQEAAATRETGSSGSSNEMGYLNQCLEIIFSENVFQFLLDKVLRTAAYQNDDEDMIYMYNAYLHKLMTCFLSNPFARDKIKESKERAMSVLSPYRIAGSHEFVQDNSSSSLHGTEIGCLPFISVLEFVSEIYQKEPELLSGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLASSQEGASKVFELLQGKAFRSIGWSTLFECLTIYDEKFKQALQTAGAMLPEIQEGDAKALVAYLNVLQKVVENGNPAERKNWFPDIEPLFKLLSYENVPPYLKGALRNAVTTFVRISPVLKDSIWAYLEQYDLPVVVGPHVQNGPQPLATQVYDMQFELNEIEARREQYPSTISFLNLLNTLIAEERDLSDRGRRFIGIFRFIYDHVFGPFPQRAYADPCEKWQLVGACLKHFHMMLSMYDIKDEDIDGVGDQSRLSSAKESSPLQTQLPVLELLKDFMSGKTAFRNIMGILLPGVNSIITERSSQLYGQLLENAVQLSLEIIILVLEKDLLLSDYWRPLYQPLDIILSQDHNQIVALLEYVRYDFQPKIQQASIKIMSILSSRMAGLVQLLLKSNAANSLIEDYAACLELRSEESQIIENSNEDPGILIMQLLIDNISRPAPNIAHLLLKFDLDTPVERTVLQPKFHYSCMKVILDILEKLLKPDMNALLHEFGFQLLYNLCVDPLTCDPTMDLLSSKKYQFFVKHLDTIGIAPLPKRKSNQTLRISSLHQRAWLLKLLAVELHAGDVSSSNHREACQKILSYLFGQVIDETSSSSLTNSAENALMRTVSKSKVLELLEIIQFRSPDTTSKLSNVLASMKYDLLAEDILGNPASSGKGGVYFYSERGDRLIDLTSFHDKLWQKYNSAYPQVSNLTGEVELNDIRETIQQLLRWGWKYNKNLEEQAAQLHMLTAWSQIVEVSVSRRITMLEDRTEILFQVLDAALSASASPDCSLKMAFILSLVALTCMAKLRDERFSFPGSLNSDSITCFDLILVRQLSNGACLTILFKLTMAILRHESSEALRRRQYALLLSYFQYCRNVVDPDVPTTVLQFLMLNEQDNEYIDLPKIDKEQTELARANFSTLRKEAQRILDLVIKDATQGSEPGKTISLYVLEALVCIDHDKYFLNQLQSRGFLRSCFASISNVSNQDGGHSLDSLQRACTFEAELTLLLRIGHKYGKSGGQVLFSMGILEHLASCRAINVPGSFRRIETRLRRDMAVDVDRQRMIVAPVLRLVFSLTSLVDASEFFEVKNKIVREVIDFVKGHQSLFDQVLRIDITEADELKMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMHALFSRDLEAPSFALSILSAESQRNSELQMFRLCFSLSSYLYFLVTKKSLRLQILDASSSYSTSIELQQPTLSLLNSLLTSVTTALERAAEEKSLLLNKIRDVNELSRQEIDEIINMCVRQDYVSSSDSIQKRRYIGMVEMCRVVGSRDQLVSLLLPLSEHVLNIFLIHLQECSGVSDATSTVKSIAFRSKPDPEQDIASLCGKLVPTLERLELLSEEKVGHNLKVFRRLATSVKEIAIRKLVL 1881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00994 1881 Coils Coil 1723 1743 - -
Bva06g00994 1881 MobiDBLite consensus disorder prediction 46 69 - -
Bva06g00994 1881 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 10 1688 IPR021827 GO:0005643
Bva06g00994 1881 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 10 1688 - -
Bva06g00994 1881 MobiDBLite consensus disorder prediction 46 65 - -
Bva06g00994 1881 Pfam Nuclear pore complex scaffold, nucleoporins 186/192/205 468 1615 IPR021827 GO:0005643
Bva06g00994 1881 Pfam Nuclear pore complex scaffold, nucleoporins 186/192/205 28 401 IPR021827 GO:0005643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00994 K14310 - gmx:100777616 3099.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00994 06 8276873 8296533 Bva06g00994 06 8276873 8296533 ECH