Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00912 ATGGCGAAATTGAAGATTGCAGGGACGTGGGCAGGCGCGGTGGAGGTAGACCTTGACACTTGGACAATATCTATGTTAAGGGAGGAAGTCGCCAAGCGATCCAACTGTGTTCCCGAATCGCTCAATTTGATATGTGCAGGGAAGATTTTGAAAGACGGTGATGGCCAACAGAACCTCAATCAATTGGGCATAAAAAATAACGCCAGAATTCTTGCGAGTCGTGTCTGTGTTGAAGAAGGGAAGGTCTTGAAACAAGTGATGATGGCTGAAGAGGAACGCTCTACCAGACTTGCTCGAGTCAAGGCAGCTGCCACTGCACTGACCAAAAGGCATGCTGATGGTTCATTACCTGTTGAAGACTTCAATATAGAACTCGAGGATCAGAATgggaaaaaagtaaatttaggTTCCGAGACTGATCAGAGGGCGGTAATGATGGGATTGATGCTTCATGCGAATGGAAAGAGACTTATTAGACAGGGAAAGTACAACGATGCATTAGAAGTGCTCTCCATTGCAGATGATTCATTCTCTCTTTGTGATCCCAAGGTGATTGAGCTTATTGACAATGTCCCAATACTGCAAATAGACATGGTGTGGTGCTATTTTATGATCCGAGACATCAGATGGTTATCAGTGGCAGGAGAGCGTCTTGAGATGGCTAGGACAGGAATTGAGCGTGCTTATGGGAAGGATTCCTTCCGTCTCAGACTCCTACAGGGAAGTCGTTATCCAGAACTGGCATTGCATTTGAGACTAGAACTGCTTGAAGGTGTTGTGGCTTATTATAGTGGTCGATTGGATAAATCAAGAGAAGCTTTGACTTCcgcaaaaatgaaatttttccAGCTGCAAGTGCCAGATGAAGCCTTATCATTTGTTACGAGCATGGGTTTCAAAGAACGTGAAGCAAAGAGAGCATTGCGGATGAACAATCAGGATGTAGGGGCTGCTGTTGATTTTCTTGTTGAGGAGAAGGCGAAGAAAATTCAGAAACGGGAGGAagatattaaaagaagaaatgaaattatGGAGCAAAAGCGCTATGGGGTGACGCCCTTAAAGAAAGCTGTGGATCTGCAGAAATTGGAGGAGTTGGTCTCTATTGGGTTTGAGAAGGAACTTGCTGCCGAAGCCCTtcgaagaaatgaaaatgatactcAGAAAGCATTGGATGATTTAACAAATCCAGAAACTAATTCTATTATACAGGTTCATATTGCGTCAAGGAAGAGCAAGAAATGGAAACAAACAACAGatgcaattgaaaattttgtacaCATGGGTTTTGAAAGATCAAGAGTGGTTGCTGCTTTTCGGGCTGGTGGCAATTTGGATCAAGTAATGCGTAGACTGACTGCAGAATCATCTGCTGGCAATGACATTGTATCAAGTGCTGCCCCCAGTGACAGTGCAAGTTCTCCTGCTCCTGTGCCAAACGATGTTGGTTCTGATGTTCTAGACCTAATTGATGACGTTGAAGGTCCATCAGAAGTCAGCAAAGCAGACGAGCGAGATGTGGAGATGGAAGATGAGCTTTCTGCAGATATAGCCAATGGAGATGCCTTAGCTGACTATGACATTGAAGTAACCACAGAAGGAGAGGCCATATCTGAGTACCTTGCTCTGCTGGAGTCGGCAGTCGGTGATGGGAAAATGCAGATTTCCCAGTA 1673 0.4256 MAKLKIAGTWAGAVEVDLDTWTISMLREEVAKRSNCVPESLNLICAGKILKDGDGQQNLNQLGIKNNARILASRVCVEEGKVLKQVMMAEEERSTRLARVKAAATALTKRHADGSLPVEDFNIELEDQNGKKVNLGSETDQRAVMMGLMLHANGKRLIRQGKYNDALEVLSIADDSFSLCDPKVIELIDNVPILQIDMVWCYFMIRDIRWLSVAGERLEMARTGIERAYGKDSFRLRLLQGSRYPELALHLRLELLEGVVAYYSGRLDKSREALTSAKMKFFQLQVPDEALSFVTSMGFKEREAKRALRMNNQDVGAAVDFLVEEKAKKIQKREEDIKRRNEIMEQKRYGVTPLKKAVDLQKLEELVSIGFEKELAAEALRRNENDTQKALDDLTNPETNSIIQVHIASRKSKKWKQTTDAIENFVHMGFERSRVVAAFRAGGNLDQVMRRLTAESSAGNDIVSSAAPSDSASSPAPVPNDVGSDVLDLIDDVEGPSEVSKADERDVEMEDELSADIANGDALADYDIEVTTEGEAISEYLALLESAVGDGKMQISQ 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00912 557 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 15 546 IPR039749 -
Bva06g00912 557 Coils Coil 327 347 - -
Bva06g00912 557 Gene3D - 361 397 - -
Bva06g00912 557 ProSiteProfiles Ubiquitin domain profile. 22 70 IPR000626 GO:0005515
Bva06g00912 557 SUPERFAMILY UBA-like 280 325 IPR009060 GO:0005515
Bva06g00912 557 MobiDBLite consensus disorder prediction 494 508 - -
Bva06g00912 557 MobiDBLite consensus disorder prediction 460 478 - -
Bva06g00912 557 Gene3D - 5 75 - -
Bva06g00912 557 Gene3D - 266 337 - -
Bva06g00912 557 SUPERFAMILY UBA-like 349 396 IPR009060 GO:0005515
Bva06g00912 557 SMART uba_6 359 396 IPR015940 -
Bva06g00912 557 SMART uba_6 287 324 IPR015940 -
Bva06g00912 557 SMART uba_6 418 454 IPR015940 -
Bva06g00912 557 MobiDBLite consensus disorder prediction 460 486 - -
Bva06g00912 557 CDD UBA 363 392 - -
Bva06g00912 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 285 325 IPR015940 -
Bva06g00912 557 SUPERFAMILY Ubiquitin-like 15 71 IPR029071 -
Bva06g00912 557 MobiDBLite consensus disorder prediction 492 511 - -
Bva06g00912 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 357 397 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00912 Bva-Chr6 7818699 7822872 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00912 - - aip:107630532 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00912 06 7818699 7822872 Bva06g00912 06 7818699 7822872 ECH