Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00883 ATGAATCGTCCAAAGATGGATTGTTCTGATCGATTTAGGTTATGGGTCTTGACTTTCTGCGTCTTATTTCTATCCGGAAATGGGTTCTACCTTCCTGGCAGTTATCCCCACAAGCATGACATTGGGAGTGAGTTGTTGGTGAAGGTGAATTCTCTCACCTCAATTGATACAGAAATTCCCTTTAGCTATTATAGTTTACCCTTTTGCCAGCCTGAGGGTGGTGTTAAGGATAGTGCTGAGAATCTCGGCGAGCTCCTCATGGGGGATCGGATCGAGAACTCACCTTACAAATTTAAGATGTACACTAATGAATCGGAGATATTCCTGTGCCGGTTGGATCCATTGTCGGCGGATCAGTTCAAGCTCTTGAAGAAGAGGATTGATGAGATGTATCAGGTTAATCTGATACTTGATAATTTGCCTGCCATTCGTTTTACAAAGAAGGAGGGTTATTTTCTGCGGTGGACAGGGTACCCTGTTGGTATTAAGATTCAAGATGTGTATTATCTGTTTAACCATCTCAAGTTCAATGTTCTTGTCCATAAGTATGAGGAGACTAATGTGGCTCGAGTGATGGGAACTGGTGATGCAGCTGAGATGATCCCAGCAGGAGGGAAGAGTGGATCAGATGAGCCTGGATACATGGTAGTTGGGTTTGAAGTGATACCTTGCAGCATTATGCATAATGCTGATTcagttaaaaaattgaagatgtaTGGCAAATATCCATCACCTATCAAATGTGATCCGTCAACTGTGGCCATGCCTATCAAAGAAGGCCAGCCAATTGTTTTCACCTATGAGGTCACTTTTGAGGAGAGTGACATCAAGTGGCCTTCCAGATGGGATGCCTACTTGAAGATGGAAGGAGCAAAGGTCCACTGGTTCTCGATCCTTAATTCACTCATGGTTATCACTTTCCTTGCTGGTATAGTTCTTGTGATATTCCTGAGGACTGTGCGTCGGGATCTGACCCGTTATGAGGAGCTAGATAAGGAAGCTCAAGCACAGATGAATGAAGAGTTATCTGGATGGAAGCTTGTTGTGGGAGATGTTTTCCGTGCTCCATCTAGTCCTGCTTTGTTGTGTGTTATGATTGGGGATGGTGTTCAAATTCTTGGGATGGCTGTTGTGACAATTTTGTTTGCTGCACTTGGATTCATGTCACCAGCCTCTCGCGGAACACTTATCACAGGTATGCTATTTTTCTATATGATACTTGGTGTTGCTGCTGGTTATGTTGCAGTTCGTCTTTGGAGGACAATTGGCTGTGGTGATCACAAGGGCTGGGCTTCGGTCTCATGGAAGGTTGCTTGTTTCTTCCCTGGTATTGCCTTTTTGATCCTCACAACCTTGAACTTCCTATTGTGGGGAAGCCAAAGCACTGGAGCCATTCCATTTTCACTCTTTGTTATACTAATCCTTCTTTGGTTCTGCATTTCCGTTCCCCTCACCCTTATTGGTGGGTACTTTGGAGCTAGGGCACCTCATATTGAGTATCCAGTTCGAACCAATCAAATTCCACGGGAAATCCCCGCACAGAAGTATCCATCCTGGTTGTTGGTTCTTGGTGCTGGCACCCTCCCATTTGGTACCCTGTTTATTGAGCTCTTCTTTATCATGTCCAGCCTTTGGATGGGTCGTGTTTACTATGTATTTGGGTTTCTCTTCGTTGTTTTGATCCTTCTCGTGGTGGTTTGTGCCGAGGTGTCTCTAGTTCTAACCTACATGCATCTCTGTGTGGAGGACTGGAAATGGTGGTGGAAATCATTCTTCGCCTCTGGTTCTGTGGCCATATACGTCTTCTTGTACTCCATAAATTACCTTATATTTGACCTCAAGAGTTTGAGTGGACCCGTGTCTGCAACTCTCTACTTGGGATATTCACTCTTCATGGTTCTGGCAATTATGCTGGCTACTGGCACAGTTGGGTTCCTCTCTTCATTCTGGTTCGTGTACTACTTGTTCTCTTCGGTTAAGTTGGATTG 1988 0.4427 MNRPKMDCSDRFRLWVLTFCVLFLSGNGFYLPGSYPHKHDIGSELLVKVNSLTSIDTEIPFSYYSLPFCQPEGGVKDSAENLGELLMGDRIENSPYKFKMYTNESEIFLCRLDPLSADQFKLLKKRIDEMYQVNLILDNLPAIRFTKKEGYFLRWTGYPVGIKIQDVYYLFNHLKFNVLVHKYEETNVARVMGTGDAAEMIPAGGKSGSDEPGYMVVGFEVIPCSIMHNADSVKKLKMYGKYPSPIKCDPSTVAMPIKEGQPIVFTYEVTFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPSSPALLCVMIGDGVQILGMAVVTILFAALGFMSPASRGTLITGMLFFYMILGVAAGYVAVRLWRTIGCGDHKGWASVSWKVACFFPGIAFLILTTLNFLLWGSQSTGAIPFSLFVILILLWFCISVPLTLIGGYFGARAPHIEYPVRTNQIPREIPAQKYPSWLLVLGAGTLPFGTLFIELFFIMSSLWMGRVYYVFGFLFVVLILLVVVCAEVSLVLTYMHLCVEDWKWWWKSFFASGSVAIYVFLYSINYLIFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLSSFWFVYYLFSSVKLD 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00883 662 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 13 662 IPR004240 GO:0016021
Bva06g00883 662 Pfam Endomembrane protein 70 60 615 IPR004240 GO:0016021
Bva06g00883 662 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 13 662 - -
Bva06g00883 662 Coils Coil 317 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00883 Bva-Chr6 7693597 7696151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00883 6 662 Miscellaneous Gene Families AT5G35160 85.866 0.0 1150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00883 K17086 - gmx:100780910 1226.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00791 05 3982228 3984742 Bva06g00883 06 7693597 7696151 BWGD
Bva06g00883 06 7693597 7696151 Bva06g00883 06 7693597 7696151 ECH