Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00882 ATGGCAGGTGGGTCTTTTGCTGCCGGCGGAGTGGCCAAGGAGAGAGCAGAGCAGTACAAGGGGAGAGTCACTCCTTATGTGATCATTGCCTGCATCGTTGCTGCCACCGGCGGGTCTCTTTTCGGCTATGACATTGGAATTTCAGGTGGGGTTACTTCAATGGATGATTTTCTCGAGAAATTCTTCCCTACagtatacaaaaataaaatgcacgCACACGAAAACAACTACTGCAAGTACAACAATCAAGGCCTTGCAGCATTTACCTCTTCTTTATACCTTGCTGGTTTAGTTGCATCTCTGGTGGCGTCTCCAGTTACCAGGAAGTATGGACGCCGGACAAGTATAATAGGTGGTGGTATCAGCTTTCTTATTGGATCAGTTCTGAATGCATCAGCTGTTAATCTGGCAATGCTTATCTTAGGGCGGATCATGCTAGGTGTTGGCATTGGATTTGGAAATCAGGCTGTTCCACTTTATTTGTCAGAGATGGCACCAACCCACCTTCGAGGAGGACTGAATATGATGTTTCAAGTAGCAACCACTTTTGGAATTTTCACAGCGAATATGGTAAATTATGGAACACAGAAGCTTAGACCAGGGGGTTGGAAGCTTTCTTTGGGCCTGGCTGCAGTACCTGCAATTATCATGACTATTGGAGGGATACTTCTTCCAGAGACACCAAATAGCTTAATAGAAAGAGGATCAAAGGAGGAAGGAAGAAGGATCCTTGAAAAAATCAGAGGAACGAGAGATGTTGACGCAGAATTCCAAGATATGGTCGATGCAAGCGAGTTTGCAAACTCAATCAAGCACCCTTTTCGTAACATTCTTGAAAGAAGGAACCGGCCACAATTTGTAATGTCAATCTTCATGCCCACGTTCCAGATCCTCACTGGCATAAATTCAATTCTCTTTTATGCTCCAGTGCTGTTTCAGAGTATGGGGTTTGGTGGAGATGCTTCTCTCTATTCCTCAGCCTTGACTGGAGGAGTTCTTGCTTCTTCAACATTCATTTCTATTGCAACAGTAGACAGATTGGGCAGGAGACCTCTACTCATCAGTGGTGGAATACAAATGATTGTATGCCAGATCATAGTTTCTATCATTTTGGGGTTGAAGTTTGGAGAAAACCAGGAACTGTCAAAGAGTTACTCAATATTGGTTGTAGTTGTGATTTGCCTTTTTGTTGTTGCTTTCGGATGGTCATGGGGCCCTCTTGGCTGGACAATCCCAAGTGAGATATTTCCATTAGAAACCCGATCAGCAGGGCAGAGCATCACGGTTGCTGTAAACCTTTTGTTCACCTTCATAATCGCCCAAGCCTTCCTTTCCCTTCTGTGTGCATTCAAGTTTGgaatcttcctcttctttgcTGGTTGGATTACTATCATGACCATCTTTGTCTGCGTCTTCCTACCTGAAACCAAGGGAATTCCCATCGAAGAGATGATATTTATATGGAGGAGGCACtggttttggaaaaaaatacttcCTGCGGAACCAGATGTCGGTGAAGCCGCAATTGGACTAAATGCCATCAAATACTA 1550 0.4284 MAGGSFAAGGVAKERAEQYKGRVTPYVIIACIVAATGGSLFGYDIGISGGVTSMDDFLEKFFPTVYKNKMHAHENNYCKYNNQGLAAFTSSLYLAGLVASLVASPVTRKYGRRTSIIGGGISFLIGSVLNASAVNLAMLILGRIMLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQVATTFGIFTANMVNYGTQKLRPGGWKLSLGLAAVPAIIMTIGGILLPETPNSLIERGSKEEGRRILEKIRGTRDVDAEFQDMVDASEFANSIKHPFRNILERRNRPQFVMSIFMPTFQILTGINSILFYAPVLFQSMGFGGDASLYSSALTGGVLASSTFISIATVDRLGRRPLLISGGIQMIVCQIIVSIILGLKFGENQELSKSYSILVVVVICLFVVAFGWSWGPLGWTIPSEIFPLETRSAGQSITVAVNLLFTFIIAQAFLSLLCAFKFGIFLFFAGWITIMTIFVCVFLPETKGIPIEEMIFIWRRHWFWKKILPAEPDVGEAAIGLNAIKY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00882 516 CDD MFS_STP 33 475 IPR044778 GO:0015145|GO:0015749
Bva06g00882 516 TIGRFAM SP: MFS transporter, sugar porter (SP) family 19 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva06g00882 516 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 4 504 IPR045262 GO:0015144
Bva06g00882 516 SUPERFAMILY MFS general substrate transporter 22 483 IPR036259 -
Bva06g00882 516 Pfam Sugar (and other) transporter 31 484 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva06g00882 516 Gene3D MFS general substrate transporter like domains 19 491 IPR036259 -
Bva06g00882 516 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 477 IPR020846 GO:0022857
Bva06g00882 516 ProSitePatterns Sugar transport proteins signature 1. 340 357 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bva06g00882 516 ProSitePatterns Sugar transport proteins signature 2. 145 170 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bva06g00882 516 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva06g00882 516 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva06g00882 516 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva06g00882 516 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva06g00882 516 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva06g00882 516 PANTHER - 4 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00882 Bva-Chr6 7687085 7690018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00882 1 508 Organic Solute Cotransporters AT4G02050 79.724 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00882 K24193 - gmx:100820434 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00882 06 7687085 7690018 Bva06g00882 06 7687085 7690018 ECH