Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00659 ATGGGAACTTTTAATAGCTTTAGAAAGGCCTACGGAGCTCTTAAGGACACCACCAAGGTTGGTCTTGCCAAGGTCAACAGCGAATACAAGGATTTGGATATTGCAATTGTAAAAGCTTCCAGTCACGTAGAATATCCTCCCAAGGAACGCCATGTTAGAAAAATATTCTATGCGACCTCAGCACACCAACCACGGGCTGATGTGGCATACTGCATTCACGCACTCTCCAAGAGACTGTCCAAGACGCGGAGTTGGATTGTTGCAATAAaggtattgataataattcaTAGGACTTTGAGAGAGGGTGATCCAACCTTCAGAGAAGAGCTTCAAAACTACTCACGCAGGGGACATGTTCTTCAAATATCCAATTTCAAAGATGACTCAAGCCCTCGAGCTTGGGATTGTTCTGCGTGGGTTCGGACATATGCACTGTTTCTAGAAGAAAAACTTGAATGTTTTAGAGTCCTTAGATATGATATTGAGTCCGCATGCCAAACAAAAGGTGCTAATAAGGGTCACACCAGAACACGGAGTTTGGGTCCTGATGAGCTGTTGGAGCATCTACCTGCACTTCAGCAACTTCTTTACCGCCTTACTGGTTGTCAGCCTGAAGGAGCAGCTTATAACAATTATCTAATACAGTATGCATCGGCACTGGTATTGAAAGAGAGCTTCAAAATATACTGTGCGATCAATGATGGAATCATAAATCTAGTGGACATGTTCTTTGATATGTCAAGACATGATGCAGTTAAGGctctgaatatatataaaagagctAGCCAACAGGCTGAAAATCTCTCTGATTTCTATGAATACTGCAAGCAATTGGAACTTGCCAGGAATTTCCATTTTCCAACACTGAGACAGCCACCTCCGTCTTTTCTAGCTACAATGGAAGAATACATCAGAGAAGCAGCCCAGACAGGATGTGTTAATAAGAGACTGGAATATCGAGAAACTGATCAATCACCTCGGAAAGAAGAAGCAGTAGAAACCAAAGAACAAGAAAGTGAAGAACAAGTTGAAGAAGTTGTTGAGGATAAACCGGTAGATGCAGAAGAAGCACAGCCCAAGAAAGAGGAAGCCGAGCCTCCTCCTCTAATATCAACTGATGAAATTGATGACTTCCTGGGTCTGGATGAAGTTAATCCAAAAGCATTAGCGTTGGAAGAAAGCAATGCTTTGGCTCTTGCAATTGTTCCACCCGGTGGAAATATTCCAGCCAATCATGGTTTAAATGACATAGGTGGGACTACCGGTTGGGAACTTGCACTGGTTACAGCACCCAGTAACCATACCAGTCAACCAGTGCAGCAAGAAATGGCTGGTGGGTTTGACAAACTACTACTAGACAGTTTGTATGAAGATGAGCATGCCAGGAGACAACTTCAACTCCAAAATGCAGGTTATGGACCAAGAGGAATGGGAATGGAAATGGGTATACAGAACCCATTTGATCATAATCAGTACAATCAACAGCGTGATCCATTTGCAATGTCAAACACCATAGCACCCCCGCCCAACGTGCAAATGGCGTTAATGGCTcagcaacagcaacagcagcaAATGATCTATCAACAACATCAACAGCAGCAAAACAATATGACTACGCTTTCTTACCATTATCAACAAGCTCAATACCCTCAACAGATGCAACTCATGACTTCTGCTAATCCATTTGGAGATCCACTATCCGTACACAACTATCCTCACAACTCAATGCCCCAAAATGGGAATTATAACCTAATGta 1757 0.4155 MGTFNSFRKAYGALKDTTKVGLAKVNSEYKDLDIAIVKASSHVEYPPKERHVRKIFYATSAHQPRADVAYCIHALSKRLSKTRSWIVAIKVLIIIHRTLREGDPTFREELQNYSRRGHVLQISNFKDDSSPRAWDCSAWVRTYALFLEEKLECFRVLRYDIESACQTKGANKGHTRTRSLGPDELLEHLPALQQLLYRLTGCQPEGAAYNNYLIQYASALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRASQQAENLSDFYEYCKQLELARNFHFPTLRQPPPSFLATMEEYIREAAQTGCVNKRLEYRETDQSPRKEEAVETKEQESEEQVEEVVEDKPVDAEEAQPKKEEAEPPPLISTDEIDDFLGLDEVNPKALALEESNALALAIVPPGGNIPANHGLNDIGGTTGWELALVTAPSNHTSQPVQQEMAGGFDKLLLDSLYEDEHARRQLQLQNAGYGPRGMGMEMGIQNPFDHNQYNQQRDPFAMSNTIAPPPNVQMALMAQQQQQQQMIYQQHQQQQNNMTTLSYHYQQAQYPQQMQLMTSANPFGDPLSVHNYPHNSMPQNGNYNLM 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00659 585 MobiDBLite consensus disorder prediction 316 373 - -
Bva06g00659 585 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Bva06g00659 585 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 572 IPR045192 GO:0048268|GO:0072583
Bva06g00659 585 MobiDBLite consensus disorder prediction 336 351 - -
Bva06g00659 585 SUPERFAMILY ENTH/VHS domain 30 162 IPR008942 -
Bva06g00659 585 SUPERFAMILY GAT-like domain 175 306 - -
Bva06g00659 585 MobiDBLite consensus disorder prediction 316 335 - -
Bva06g00659 585 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 572 - -
Bva06g00659 585 Gene3D ANTH domain 168 323 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Bva06g00659 585 MobiDBLite consensus disorder prediction 352 368 - -
Bva06g00659 585 Pfam ANTH domain 31 306 IPR011417 GO:0005543
Bva06g00659 585 CDD ANTH_N 32 154 - -
Bva06g00659 585 SMART enth_2 30 161 IPR013809 -
Bva06g00659 585 Gene3D - 6 161 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00659 Bva-Chr6 6453408 6458558 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00659 K20044 - gmx:100786060 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00991 05 5061144 5066377 Bva06g00659 06 6453408 6458558 BWGD
Bva06g00659 06 6453408 6458558 Bva06g00659 06 6453408 6458558 ECH