Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00628 atGGCCCAGGCTGTAGTTTCCTTTGTTGTGCAAAGCCTTGGTAATTTGCTTATCCAAGAAGCACTTTTCTTAGATGGGGTATCAGAGAGAGTGAGGCAGCTGCAAACTGAACTGAGGCTGATACAGTCTTACTTACAAGATGCAGATAGAAGgcaagatgaagatgaaacaCTCCGGACTTGGATTTCAGAAATCAGAGAAGCTGCTTATGATTCTGATGATGTTATTGAGACATATGCTATCAGAGTAGAATCAAGAAGAAGCAGGGTTGATGTTCTGAACATCATCAAGAGGTACGCTTCAATTAtccaaaaattcataaaaatccACCAGGTGGGATCCCAGGTTGAAGCTATTCTAGCAAGAATTTATGACCTCACAAGAAGTCTTGAAACTTATGGCATAAGACCAGAACGAGTAGGGGCCTCAAGTTCTATGCATGGAAGACAACGAGCTTTGAGAAGATCTTACTCTCATATGGTTGAAGATGACATAATTGGTGTGGAAGAAGATGTGAACAATTTGGTATCTTATTTGGTGAACCCTGATAAAAGTTGTAAAGTAGTTGCTATTTGTGGAATGGGGGGTTTAGGGAAAACCACAATGGCTAAGAAGGTTTACCATAATAGTGATGTGAGGCATCATTTTGATAGTTTTGCTTGGGCTTACATATCTCAGCAATGCCAAGCAAGGGATGTGTGGGAAGGGATTCTTTTCGAGTTGATATCTCCTTCCAAAGAGCAAAGAGAGGAAATTGTGAATAAGAGAGAGGATGAAGTTGCAAAGATGCTTTATCAAGTTCAAATGGAGAAGAGATGTTTAGTAGTACTTGATGACATTTGGAGGGCAGAGACTTGGAGATATCTAAGACCTGCATTCCCCAATGAAATAGGACAAGGATTAACGGGCAGCAAAATATTGCTTACAACTCGGAATAGAGATGTTGCATTGGATATAGATCCGACATGTTTTCTACATCAACCAAGTTGCTTAAATGAAGATGACAGTTGGGAATTGTTCCAAAGGAAGGCATTTCCAACCACAGATGACCCGGATTTTACAATTAGcacagagaaggaaaagatcGGAAGGGAAATGGTTGGAAAGTGTGGAGGTTTGCCATTGGCTATCATTGTGCTTGGAGGACTCTTGGCAAAAAAGCCAACATTCTATGACTGGGAGATGATACGTCAAAACATTAACTCGTACTTGAGGCGGGCAGAAGGGCGTGAGCAACTGTTGGGAGTATCAGAGGTGCTAGCCATAAGCTATTATGAATTACCATACCATTTGAAACCATGTTTCCTACATTTGGCTCATTATCCAGAAACTGTAAAAATAGCCACAAAGAAACTAATCAGAATATGGGTGGCAGAGGGTATCATATCATTGTTGCAAAGTGAAGTAGAATTAGGAAATGAGACAATGGAGGATGTGGCACAACGTTACTTGAATGAGCTGGTGGAGAGGTGCATGATTCAGGTAGTGGAGAAGAGTTCAACAGGAAGAATCAGAACTTGCCAAATGCACAACCTTATGAGAGACCTTTGCTGTACAAAGGCAAATGAGGAAAACTTTCTTCAAATTGTCAATTCCAGGAATGTAAATGAGCCTATGGATTGTTTTAGTTTACCCATGGTCTCTAGAACAAGTTCTGTTGGTAAGATTCGTCGGATTGCTTTGTTTTTGGACCAAGATATCAACGGATTCTTCCTTTCACAATTCAAAAGGCAGCGCCATCTCAGGTCTCTAATTTGCTTTCATGAGAAGACAGTTCAGCTAAAAGAGTGGGAGCTAATGAAATCTGTTTTCAACAACCTCAAGCTGCTTAGAGTGTTGGACTTGGAAGGCATTCAGGGCCAAGGTGGAAAattgccaaaagaaattgGCTACTTGATCCACCTAAGGTTTCTTAGTCTAAGAAATACAGACATTGATGAGTTGCCTTCAACAATAGGCAATTTGAAGTGCTTACAGACTCTTGATCTCTTGACATGGAATTCAACTGTGCAAATACCAAATGTCATATGCAAGATGGAAAGATTGAGACATTTATATCTGCCAGAGTCATGTGGCGATGGTGCCAGAAAATGGCAATTGTTCAATCTGAGAAACTTGCAGACCTTGGTCAATTTCCCGGCAGAGAAATGTTATGTAAGTGATCTCATTAAGCTGACCAACTTGAGAAAATTGGTAGTAGACGATCCCACATTTGGGGACATCTTCAAATCTCAAAGTGTGACATTTAGCTGCCTTGAGTCATTATTCTTTGTTAGTACAGAAGACATCTCAGTTGCCCAAGTTGTAGAAGGGTGTcctaatatttataagttgcAAATAGAAGGGCCTATGGACAAGTTACCAGAAGCACACCAAATTTCCTCCAAGCTTGCCAAGCTCAAGTTACACGGTTCTAGGCTTGAAATGGATCCAATGGCAACATTGGAGAAGCTGCCCAATTTGAGGATCCTCGAGCTGCAAATGGATTCCTACTTGGGGAAGGAGTTAGTTTGCAATAGCAAAGGTTTTCCTCAGCTAAAATCTCTGCTTTTATGGGACTTAACTGATCTTGAACAGTGGAAATTGGACAAAGAAGCTATGCCTAATCTTATCAGGTTGAAGATTTCAAACTGCACCAAGCTGAAGATGGTTCCAGATGGATTAAGGTTTGTCACCACTCTTCAGGAATTGGAGATTCGATCAATGTTTCGAGCCTTCAGAAACAAACTTGAACAAGGAGGAGAAGATCATTACAAAGTCCAACATGTCCCAAGTCTAGCATTTTGTTACTGTGACTACTA 2801 0.3959 MAQAVVSFVVQSLGNLLIQEALFLDGVSERVRQLQTELRLIQSYLQDADRRQDEDETLRTWISEIREAAYDSDDVIETYAIRVESRRSRVDVLNIIKRYASIIQKFIKIHQVGSQVEAILARIYDLTRSLETYGIRPERVGASSSMHGRQRALRRSYSHMVEDDIIGVEEDVNNLVSYLVNPDKSCKVVAICGMGGLGKTTMAKKVYHNSDVRHHFDSFAWAYISQQCQARDVWEGILFELISPSKEQREEIVNKREDEVAKMLYQVQMEKRCLVVLDDIWRAETWRYLRPAFPNEIGQGLTGSKILLTTRNRDVALDIDPTCFLHQPSCLNEDDSWELFQRKAFPTTDDPDFTISTEKEKIGREMVGKCGGLPLAIIVLGGLLAKKPTFYDWEMIRQNINSYLRRAEGREQLLGVSEVLAISYYELPYHLKPCFLHLAHYPETVKIATKKLIRIWVAEGIISLLQSEVELGNETMEDVAQRYLNELVERCMIQVVEKSSTGRIRTCQMHNLMRDLCCTKANEENFLQIVNSRNVNEPMDCFSLPMVSRTSSVGKIRRIALFLDQDINGFFLSQFKRQRHLRSLICFHEKTVQLKEWELMKSVFNNLKLLRVLDLEGIQGQGGKLPKEIGYLIHLRFLSLRNTDIDELPSTIGNLKCLQTLDLLTWNSTVQIPNVICKMERLRHLYLPESCGDGARKWQLFNLRNLQTLVNFPAEKCYVSDLIKLTNLRKLVVDDPTFGDIFKSQSVTFSCLESLFFVSTEDISVAQVVEGCPNIYKLQIEGPMDKLPEAHQISSKLAKLKLHGSRLEMDPMATLEKLPNLRILELQMDSYLGKELVCNSKGFPQLKSLLLWDLTDLEQWKLDKEAMPNLIRLKISNCTKLKMVPDGLRFVTTLQELEIRSMFRAFRNKLEQGGEDHYKVQHVPSLAFCYCDY 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00628 933 Gene3D - 5 113 - -
Bva06g00628 933 Gene3D - 147 321 IPR027417 -
Bva06g00628 933 Gene3D Ribonuclease Inhibitor 547 926 IPR032675 -
Bva06g00628 933 PRINTS Disease resistance protein signature 267 281 - -
Bva06g00628 933 PRINTS Disease resistance protein signature 816 832 - -
Bva06g00628 933 PRINTS Disease resistance protein signature 370 384 - -
Bva06g00628 933 PRINTS Disease resistance protein signature 188 203 - -
Bva06g00628 933 Gene3D - 330 422 IPR042197 -
Bva06g00628 933 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 438 IPR027417 -
Bva06g00628 933 Pfam Rx N-terminal domain 5 88 IPR041118 -
Bva06g00628 933 SUPERFAMILY L domain-like 508 901 - -
Bva06g00628 933 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 2 905 - -
Bva06g00628 933 Gene3D - 423 521 IPR036388 -
Bva06g00628 933 PANTHER DISEASE RESISTANCE PROTEIN RP 2 905 IPR044974 GO:0006952
Bva06g00628 933 CDD RX-CC_like 2 128 IPR038005 -
Bva06g00628 933 Pfam NB-ARC domain 169 424 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00628 Bva-Chr6 6277217 6280592 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00628 606 830 Receptor kinase-like Gene Family AT3G47090 25.957 8.18e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00628 - - gmx:100305356 1265.75