Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00608 ATGGGTTCGGCCGTCCAAATGAGGAATTTGCTAAGGGGAAAGTTCTACCTGCTCCTTTTGTGTTTCTGGGTTTCTTCAGTCACGGCCTCTGTGACTTACGACCGCAAAGGCCTAATTATTGATGGGAAGAGAAGAATTCTGATATCTGGTTCCATTCACTACCCAAGAAGCACACCTGAGATGTGGCCAGACCTCATACAGAAGGCCAAAGATGGAGGCTTAGATGTTATTCAGACCTATGTGTTTTGGAACGGTCACGAGCCTTCTCCTGGAAAAtaTTATTTCGAGGATAGATACGACTTGGTGAAGTTCATCAAGCTGGTACAGCAAGCTGGCCTTTATGTTCATCTCCGCATTGGTCCCTACGTCTGTGCCGAATGGAACTTTGGAGGATTTCCTGTTTGGCTAAAATATGTACCGGGTATTCAATTCAGAACAGACAACGGGCCGTTCAAGGCGGCAATGCAAAAATTTACTACGAAAATTGTTGACATGATGAAGGCAGAGAAGTTATATCAAACCCAAGGAGGTCCAATAATTCTGTCTCAGATTGAGAACGAGTATGGACCAGTGGAAGGGCAAATGGGTGCCGCTGGAAAAGCTTACACGACATGGGCAGCTCAAATGGCCGAGGATTTGGGTACTGGTGTGCCATGGGTTATGTGCAAGCAAGATGACGCCCCTTCTCCAGTTATTGATACCTGCAATGGATTCTACTGTGACAACTACAAACCCAACAGCAAGAACAAACCCAAAATGTGGACTGAGAACTGGACTGGCTGGTACACTGAGTTTGGTGGTGCAGTCCCTCGTAGGCCAGCAGAAGACTTGGCATTTTCAGTTGCCAGATTCGGACAGAGTGGTGGCTCATTCATGAACTACTATATGTACCATGGTGGAACTAATTTCGGGACAACTAGTGGCCACTTCATTGCCACAAGCTATGATTATGATGCTCCTCTTGATGAATATGGAATTCCAAATGAACCCAAATGGGGGCATTTGAAAGCTCTGCACCAAGCAATACATCAGAGTGAGCCGGCTTTAGTGTCTTCAGATGCTCGGGTGACATCACTTGGATATAACCTGGAGGCTCATGTATACAAGACAAATTCTGGTGACTGTGCTGCATTCCTTGCCAATTATGACACCCAATCTTCTGCGAAAGTCACATTTGGGAATGGGCAATATGAACTACCACCTTGGTCTATCAGCATTCTACCTGACTGCAAAACTGCAGTTTTCAATACTGCAAGGGTTGGAGCCTTGAGCTACCCAAAGATGACGCCCATAAGTGGATTCTCCTGGCAGTCATACAATGAAGAACCTGCGTCTGCCAGTGGAGATGATTCAATTACAGCATTTGCACTATGGGAGCAGGTTAATGTCACCCGGGATTCTTCAGATTATTTGTGGTACATGACAGATGTCAACATTGATGCTGATGAAGCCTTCATAAAGAATGGCCAATCTCCTGTTCTCACTGTAATGTCAGCAGGCCATGCTCTCCATGTTTTTGTTGATGGCCAACTCTCAGGAACTGTGTATGGAGGACTGGGGAATCCTAAACTAACATTTAGTAACGGTGTGAATCTAAGGGTTGGCAATAACAAGATTTCTCTACTAAGTGTTGCTGTGGGTCTCCCGAATGTGGGTTCCCGTTTTGAGACATGGAATGCTGGGGTGTTAGGCCCAGTCACACTGGATGGTCTAAATGAGGGGACAAGAGACTTGTCTCAGCAGAAATGGTCATACAAGGTCGGTCTGAAAGGTGAAGCCTTGGGCCTCAATACAGAAAGTGGAAGTGGCTCTGTTGAATGGACACAAGGCACAACATTGGCCGAAAAGCAACCCTTGACATGGTACAagACAAGTTTCAATGCACCAGCAGGCAATGATGGATTGGCCTTAGATTTGGGTAGCATGGGAAAGGGTCAAGTATGGGTAAATGGTCAAAGCATCGGACGCCATTGGCCTGCATATATAGCACACGGTAGTTGCAATGCAGCCTGTAATTATGCTGGAATGTATACAGAGAAGAAATGTCGAACTCAGTGTGGACAACCCTCCCAAAGATGGTATCATGTTCCTCGTGCATGGCTGAAGCCAAGCGGCAATTCTTTGGTTGTGTTTGAAGAATGGGGAGTGACAGCCTCTGTGACTTATGATAGCAAAGGTATAATTATTAATGGGAAGACAAGAATTCTGATCTCTGGCTCCATTCACTACCCAAGAAGCACACCTCAGATGTGGCCAGACCTCATACAAAAAGCCAAAGATGGAGGCTTGGATGTTATTCAGACCTACGTATTTTGGAATGGTCACGAGCCTTCTCCTGGAAAATATTATTTCGAGGATAGATACGACTTGGTCAAGTTCATCAAGCTGGTACAAGCAGCTGGACTTTACCTTCATCTCCGGATTGGTCCTTTCGCATGTGCAGAATGGAATTTTGGGGGATTTCCTGTTTGGCTAAAATTTGTGCCCGGAATTGAATTCAGAACAGACAATGAGCCATTCAAGGCGGCAATGCAAAAATTCACTACCAAGATTGTCGACATGATGAAGGCAGAAAAGCTATTTGAAACACAGGGAGGTCCAATAATTCTGTCCCAGATTGAGAACGAGTATGGACCAGTAGAATGGGAGATTGGTGCCCCGGGCAAAGCTTACACGGCATGGTTTTCTCGAATGGCTCTAAGCTTGAATACTGGTGTGCCCTGGGTTATGTGCAAGCAAGAGGATGCTCCTTCTCCAATTATTGACGCATGCAATGGATTCTACTGTGAAAACTACAAACCCAATGCCAAGAACAAACCCAAAATGTGGACAGAGAACTGGAGTGGATGGTACACCGAATTTGGTGGCGCAGTTCCTGTTAGACCAGCAGAAGACGTGGCATTTGCAGTTGCCAGATTCATACAGAATGGTGGTTCATTCATGAACTACTATATGTTTCATGGAGGAACTAACTTTGATAGAACTAATGGTCTCTTCGTTGTCACAAACTATGAATATGATGCTCCTCTTGATGAATATGGACTTCCAAATGAACCAAAATATGGGCATTTAAAAGCTTTGCACCAAGTAATACGTCAATGTGAGGCAGCTTTAGTGTCTGCAGATGCCACTGTCACATGGCCTGGACAAAATCTAGAGGTTCATGAATACAAGACAAATTCTGGTGTTTGTGCTGCATTCCTTGCAAATTATAACACCAACTCTTCCGCAAAAGTTACATATGGAAACGGGCAATATGAATTACCGCCTTGGTCTATCAGCATTCTACCTGACTGCAAAACTGCTGCTTTCAACACTGCAAAGGTTGGAAAACAGAGCTACCTAAAGGATACACCTGTAAGTGGATTCACCTGGCAATCATACAGTGAAAATCCTGAATCTGCCAGTGGAAATGATCCAATTACATCATATGAACTCTGGGAGCAGATTAATGTCACCCGAGATTCTTCAGATTATTTGTGGTACATGACAGAAGTCAACATTGATGCCGGTGAAGCCTTCTTAAAAAATGGGCAATCTCCTGTTCTCACTGTAATGTCGGCTGGTCATCTCCTAAATGTTTTCATCAATGATCAACTTTCAGGAACTGTGCATGGGAGTTTAGCAGATCCTAGACTAACATTTAGTGGGAAAGTGAACCTGAAGGTTGGCGTTAACAAGATTTCTTTGCTCAGTGTTGCTGTGGGTCTCGCGAATGTGGGAGTGCATTTTGAGAAGTGGAACGTTGGGGTGTTAGGTCCAGTCACACTCAAGGGTCTAAACAAAGGGACCATGGACTTGTCTCGCCAGAAATGGTCTTACAAGGTTGGTCTGAAAGGTGAAGCCTTGGGCCTTAATGCTGTAAAAGGAAGTGGCTCCGTTGCATGGACACAAGGAGCATCATTGGCTAAGAAACAACCTTTGACGTGGTACAAGACAAGTTTCAATGCACCACCTCCAGCAGGAAATGAGGCATTGGCTTTAGACCTGGGTAGCATGGGAAAGGGTCAAGTGTGGGTAAATGGTCGGAGCGTCGGACGCCATTGGCCCGGAAACATAGCAAAGGGTGCTTGTAGTCCATGTAATTATGCTGGAACTTACACAGACACCAAATGTAGAACCCAGTGCGGACAGCCCTCCCAAAGATGgtATCATGTTCCTCGCTCATGGCTGAACCCGAGTGACAATTTCTTGGTGGTGTTTGAAGAATTGGGCGGTGATCCCACAGGGATTTCTTTGGTGAAACGAACAAGAACTCAGTA 4262 0.4521 MGSAVQMRNLLRGKFYLLLLCFWVSSVTASVTYDRKGLIIDGKRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGIQFRTDNGPFKAAMQKFTTKIVDMMKAEKLYQTQGGPIILSQIENEYGPVEGQMGAAGKAYTTWAAQMAEDLGTGVPWVMCKQDDAPSPVIDTCNGFYCDNYKPNSKNKPKMWTENWTGWYTEFGGAVPRRPAEDLAFSVARFGQSGGSFMNYYMYHGGTNFGTTSGHFIATSYDYDAPLDEYGIPNEPKWGHLKALHQAIHQSEPALVSSDARVTSLGYNLEAHVYKTNSGDCAAFLANYDTQSSAKVTFGNGQYELPPWSISILPDCKTAVFNTARVGALSYPKMTPISGFSWQSYNEEPASASGDDSITAFALWEQVNVTRDSSDYLWYMTDVNIDADEAFIKNGQSPVLTVMSAGHALHVFVDGQLSGTVYGGLGNPKLTFSNGVNLRVGNNKISLLSVAVGLPNVGSRFETWNAGVLGPVTLDGLNEGTRDLSQQKWSYKVGLKGEALGLNTESGSGSVEWTQGTTLAEKQPLTWYKTSFNAPAGNDGLALDLGSMGKGQVWVNGQSIGRHWPAYIAHGSCNAACNYAGMYTEKKCRTQCGQPSQRWYHVPRAWLKPSGNSLVVFEEWGVTASVTYDSKGIIINGKTRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKLVQAAGLYLHLRIGPFACAEWNFGGFPVWLKFVPGIEFRTDNEPFKAAMQKFTTKIVDMMKAEKLFETQGGPIILSQIENEYGPVEWEIGAPGKAYTAWFSRMALSLNTGVPWVMCKQEDAPSPIIDACNGFYCENYKPNAKNKPKMWTENWSGWYTEFGGAVPVRPAEDVAFAVARFIQNGGSFMNYYMFHGGTNFDRTNGLFVVTNYEYDAPLDEYGLPNEPKYGHLKALHQVIRQCEAALVSADATVTWPGQNLEVHEYKTNSGVCAAFLANYNTNSSAKVTYGNGQYELPPWSISILPDCKTAAFNTAKVGKQSYLKDTPVSGFTWQSYSENPESASGNDPITSYELWEQINVTRDSSDYLWYMTEVNIDAGEAFLKNGQSPVLTVMSAGHLLNVFINDQLSGTVHGSLADPRLTFSGKVNLKVGVNKISLLSVAVGLANVGVHFEKWNVGVLGPVTLKGLNKGTMDLSRQKWSYKVGLKGEALGLNAVKGSGSVAWTQGASLAKKQPLTWYKTSFNAPPPAGNEALALDLGSMGKGQVWVNGRSVGRHWPGNIAKGACSPCNYAGTYTDTKCRTQCGQPSQRWYHVPRSWLNPSDNFLVVFEELGGDPTGISLVKRTRTQ 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00608 1420 SUPERFAMILY (Trans)glycosidases 30 344 IPR017853 -
Bva06g00608 1420 SUPERFAMILY Galactose-binding domain-like 582 719 IPR008979 -
Bva06g00608 1420 PANTHER BETA-GALACTOSIDASE RELATED 715 1417 IPR001944 GO:0004553|GO:0005975
Bva06g00608 1420 PANTHER BETA-GALACTOSIDASE RELATED 16 715 IPR001944 GO:0004553|GO:0005975
Bva06g00608 1420 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 176 188 IPR019801 GO:0004553|GO:0005975
Bva06g00608 1420 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 865 877 IPR019801 GO:0004553|GO:0005975
Bva06g00608 1420 PANTHER BETA-GALACTOSIDASE 715 1417 - -
Bva06g00608 1420 PANTHER BETA-GALACTOSIDASE 16 715 - -
Bva06g00608 1420 SUPERFAMILY Galactose-binding domain-like 404 572 IPR008979 -
Bva06g00608 1420 Pfam Glycosyl hydrolases family 35 727 1029 IPR031330 -
Bva06g00608 1420 Pfam Glycosyl hydrolases family 35 38 341 IPR031330 -
Bva06g00608 1420 Gene3D Glycosidases 715 1034 - -
Bva06g00608 1420 Gene3D Glycosidases 24 347 - -
Bva06g00608 1420 Gene3D - 571 666 - -
Bva06g00608 1420 Gene3D - 1285 1420 - -
Bva06g00608 1420 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Bva06g00608 1420 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Bva06g00608 1420 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Bva06g00608 1420 PRINTS Glycosyl hydrolase family 35 signature 644 660 IPR001944 GO:0004553|GO:0005975
Bva06g00608 1420 PRINTS Glycosyl hydrolase family 35 signature 617 631 IPR001944 GO:0004553|GO:0005975
Bva06g00608 1420 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Bva06g00608 1420 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Bva06g00608 1420 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Bva06g00608 1420 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Bva06g00608 1420 SUPERFAMILY (Trans)glycosidases 720 1035 IPR017853 -
Bva06g00608 1420 SUPERFAMILY Galactose-binding domain-like 1093 1261 IPR008979 -
Bva06g00608 1420 Pfam Beta-sandwich domain in beta galactosidase 349 420 IPR041392 -
Bva06g00608 1420 Pfam Beta-sandwich domain in beta galactosidase 1038 1109 IPR041392 -
Bva06g00608 1420 SUPERFAMILY Galactose-binding domain-like 1271 1413 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00608 Bva-Chr6 6189604 6200487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00608 17 715 Glycoside Hydrolase AT3G13750 71.875 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00608 - - gmx:100792629 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01031 05 5287675 5305050 Bva06g00608 06 6189604 6200487 BWGD
Bva06g00608 06 6189604 6200487 Bva06g00608 06 6189604 6200487 ECH