Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00606 ATGGTGATCAAGAAACCACGGATTGTGATTATTGGAGCAGGAATGGCGGGTCTTACCGCTGCCAACAAGCTCCACACTGCCACTGCCTCCAAAGACTTGTTTGAGCTCTGTGTTGTTGAAGGTGGAACCAGGATTGGTGGCAGAATCAACACCTCAGAGTTTGGTGGTTACCGTATTGAGATGGGTGCTACTTGGATCCATGGAATTGGAGGCAGCCCGCTTCACGAGATTGCTCAACAAATCCATTCATTGGAGTCTGAGCAGCCATGGGAGCGCATGGACGGGTCAGATGAACCCACCGCCACCGTCGCTGAAGGTGGGTTCCAGCTAAACCCTTCCATTGTTGACCCCATCACCAAGCTTTTCAAGAATCTCATGGATTATGCACAGGGGAAGCTCACTGAAGATAGTGAAAGAAGTCAACTTTACAGTTACTGTAAGCTCGCGGCTAAAGCTTCCAATGTTTCAACACCCAACGGTGGCTGTGGAAATTCGAGTGTTGGTTATTTTCTGAGACAGGGCCTCGATGCTTACTGGGTTTcagtgaaagagaaaaaagaggagCTCAAAGGGTATGGGAACTGGAGCAGAAAGTTACTTGAAGAAGCAATCTTTGCAATGCATGAGAGCACCCAGAGGACATATACATCAGCTGGTGACCTTTTCACTCTAGATTATTGTGCAGAGCGCGAATACCAGATGTTTCCAGGTGAAGAAATTACAATTGCTAAAGGCTACTTGAGCATTATTGAATCATTAGCTTCTGTTCTACCACCTGGGTTAGTCCAATTAGGTCGCAAGGTCACAAAAATTGAATGGCAGCCTCAGAATCAGAGACACGAAGAAGGGGTGGACGTTGAAAATGGCTATTCCTCTAGGCCTGTGAAGCTACATTTCTGTGATGGTTCTATTATGTCTGCAGATCACGTCATTGTTACAGTTTCCTTGGGAGTTCTAAAAGCTGCAATTCGTGACGATTCAGGTATGTTCTGCCCTCCTCTGCCCCCTTTCAAGGCTGAGGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAATAAGTTGTTTCTGCAATTGAGTCCAAATCATGATGGACTAGAAGATGAACACTCCAATACCAAGTCCAAGAAGGCCTTCCCCTACCTGCAACTGGTTTTTCATCCACCTCACTCTGAGCACAAGCACAAGAAAATACCATGGTGGATGAGAAGGACAGCTAGCCTTTGTCCCATCTACAACGATTCTAGAGTCCTTCTGTCTTGGTTTGCCGGAGAAGAAGCACTAGCACTTGAGTCACTCAAAGATGAAGAGATCATTAATGGGGTTTCAGCAACAGTTTCTAGCTTTCTATCACATACCCACAGGGAAAGGGATACTAATTCTCATAAATTGTGCAATGGGAACGTAAACTCTGAGGAAAACTCTAATGGAAACGAAGTGAAATTCAGTAAAGTCTTGAAGAGCCAATGGGGGACTGATCCTCTATTTTTGGGCTCATACAGTTATGTTGCAGTAGGATCAAGTGGTGATGATTTAGATGCAATGGCAGAGCCATTGCCAGAAGATAGCAGTTGCAAGTCTTGTGCTTCACCTCCACTCCAAATTCTATTTGCAGGGGAAGCAACTCACAGAACCCACTATTCTACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCGGACAGGCTTCTTCAACATTATCACTGTGTTGGGATTTA 1715 0.4484 MVIKKPRIVIIGAGMAGLTAANKLHTATASKDLFELCVVEGGTRIGGRINTSEFGGYRIEMGATWIHGIGGSPLHEIAQQIHSLESEQPWERMDGSDEPTATVAEGGFQLNPSIVDPITKLFKNLMDYAQGKLTEDSERSQLYSYCKLAAKASNVSTPNGGCGNSSVGYFLRQGLDAYWVSVKEKKEELKGYGNWSRKLLEEAIFAMHESTQRTYTSAGDLFTLDYCAEREYQMFPGEEITIAKGYLSIIESLASVLPPGLVQLGRKVTKIEWQPQNQRHEEGVDVENGYSSRPVKLHFCDGSIMSADHVIVTVSLGVLKAAIRDDSGMFCPPLPPFKAEAISRLGFGVVNKLFLQLSPNHDGLEDEHSNTKSKKAFPYLQLVFHPPHSEHKHKKIPWWMRRTASLCPIYNDSRVLLSWFAGEEALALESLKDEEIINGVSATVSSFLSHTHRERDTNSHKLCNGNVNSEENSNGNEVKFSKVLKSQWGTDPLFLGSYSYVAVGSSGDDLDAMAEPLPEDSSCKSCASPPLQILFAGEATHRTHYSTTHGAYFSGLREADRLLQHYHCVGI 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00606 571 Pfam Flavin containing amine oxidoreductase 15 563 IPR002937 GO:0016491
Bva06g00606 571 Gene3D - 512 569 IPR036188 -
Bva06g00606 571 Gene3D - 2 162 IPR036188 -
Bva06g00606 571 SUPERFAMILY FAD/NAD(P)-binding domain 3 566 IPR036188 -
Bva06g00606 571 PANTHER POLYAMINE OXIDASE 5-RELATED 1 570 - -
Bva06g00606 571 SUPERFAMILY FAD-linked reductases, C-terminal domain 346 500 - -
Bva06g00606 571 Gene3D - 274 505 - -
Bva06g00606 571 PANTHER FLAVIN MONOAMINE OXIDASE 1 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00606 Bva-Chr6 6177980 6180165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00606 K12259 - gmx:100783032 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01033 05 5308104 5310280 Bva06g00606 06 6177980 6180165 BWGD
Bva06g00606 06 6177980 6180165 Bva06g00606 06 6177980 6180165 ECH