Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00568 atggaaaagaaggcATTTTGCGTGATGGGGGAAGCAGCAAGTATTGGCGCTAGTGTTTGTCACAATCAAAATGGCAGCAGCGTTGATCAGAATCATGAATTGGATGTATACCCTCTGAGCAGTTACTACTTTGGATCCAAAGATGCCATTCCCTTCAAAAACGACACTTCAGCAGATCGTGTTCAGAGGATGAAGTCCAActATGCTGCTCATGGATTACGAACTTGTGTGGAAGCAGTTATACTGGTTGAGTTGTTCAAACATCCACACTTGTTGTTATTGCAATTAAGAAATTCCATCTTTAAGCTCCCTGGTGGCCGCTTAAGATCAGGTGAATCAGATATTGATGGATTGAAGCGTAAGCTGTCAAGAAAGCTTTCTGTTGATGAAGGCGGGGATGGTATAGAATGGGAGgTGGGTGAATGCCTGGGAATGTGGTGGAGGCCTGACTTTGAAACATTGCTGTATCCTTACTTGCCACCAAACGTGAAAAAGCCAAAGGAGTGTACAAAACTCTTCCTTGTGAAGCTGCCATTAAGTCGGAAGTTCATAGTGCCTAAGAACCTACGGTTGCTTGCTGTCCCATTATGCCAAATTCATGAAAATCACAAGACATATGGACCCATTATATCAGGAGTCCCGCAGCTCGTTTCGAAATTTGCTTTCAACATGATCGAATCTTA 683 0.4217 MEKKAFCVMGEAASIGASVCHNQNGSSVDQNHELDVYPLSSYYFGSKDAIPFKNDTSADRVQRMKSNYAAHGLRTCVEAVILVELFKHPHLLLLQLRNSIFKLPGGRLRSGESDIDGLKRKLSRKLSVDEGGDGIEWEVGECLGMWWRPDFETLLYPYLPPNVKKPKECTKLFLVKLPLSRKFIVPKNLRLLAVPLCQIHENHKTYGPIISGVPQLVSKFAFNMIES 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00568 227 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 1 20 226 - -
Bva06g00568 227 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 32 224 - -
Bva06g00568 227 Pfam Nucleotide hydrolase 33 220 IPR016706 GO:0003729|GO:0005849|GO:0006378
Bva06g00568 227 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 20 226 IPR016706 GO:0003729|GO:0005849|GO:0006378
Bva06g00568 227 PIRSF CPSF-25 9 227 IPR016706 GO:0003729|GO:0005849|GO:0006378
Bva06g00568 227 SUPERFAMILY Nudix 77 150 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00568 Bva-Chr6 5961374 5963655 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00568 K14397 - qsu:112017344 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00568 06 5961374 5963655 Bva06g00568 06 5961374 5963655 ECH