Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00550 ATGGCCGCAACTTCGGCAGTTTCCATGGCTATGCCAGTAACTTACGCCAGCCAGAAGAGGCTGGTGCCCAGCTCTGAGGCATTCTTCCAGCCATTGCCGCATCGGCCATCAAAGGCTGCTGCTGCAACAAAAAGCAACGGCAAGTTTGCAGTCAGGGCCTCCTTGAAGGAGAAAGCAGTCACAGGCCTCACAGCAGCTGCATTGACAGCTTCAATGATGATTCCTGATGTGGCTGAAGCTGCTGTCACACCTTCTCTCAAGAACTTCTTGCTCAGCATCGCCGCCGGTGGAGTTGTGCTCACAATCATTGTCGGTGCCGTGATCGGCGTCGCCAATTTCGATCCCGTCAAGCGGACCTA 359 0.5487 MAATSAVSMAMPVTYASQKRLVPSSEAFFQPLPHRPSKAAAATKSNGKFAVRASLKEKAVTGLTAAALTASMMIPDVAEAAVTPSLKNFLLSIAAGGVVLTIIVGAVIGVANFDPVKRT 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00550 119 Pfam Photosystem II reaction centre X protein (PsbX) 82 118 IPR009518 GO:0009523|GO:0015979|GO:0016020
Bva06g00550 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Bva06g00550 119 PANTHER OS07G0673550 PROTEIN 1 119 - -
Bva06g00550 119 Gene3D Single helix bin 81 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00550 Bva-Chr6 5868854 5869213 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00550 - - gmx:100306291 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01093 05 5609377 5610001 Bva06g00550 06 5868854 5869213 BWGD
Bva06g00550 06 5868854 5869213 Bva06g00550 06 5868854 5869213 ECH