Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00546 ATGCAGTGTTTGAGAATCTGTTCTTCCTTTTCCCCTTCGTTTTCTCACTCTTTATCGCCTTCCAAGCACCTCCTTCACCTCAAGGCCTCTTCGTCATTCAAACCCTACTCTCATTCTCCGCCCGCCAGATCTTCGATCAAGATGTCTACCCAAATCGTTGAGCACATCGTGCTGTTTAAGGTCAAAGACGACACTGAACCTTCGAAGGTCAACTCCATGGTCAATGAACTTGGTGCCCTGGTCTCCCTCGACCCGGTCCTCCACCTTACCGTGGGCCCACTGCTACGCAATCGATCGTCGTCTTTGACTTTCACTCATATGCTCCACAGTCGGTACAAGTCCAAAGATGACCTCAATACCTATTCGGCACATCCCGATCATGTTAGTGTTGTTAAAGGTTCTGTGCTTCCAATCTGTGAAGACATCATGGCCGTTGATTGGGTCACCGAGGACTTGCAGGGCGATTTAGCTCCAGCACCGGGTTCGGCACTGCGGGTGAGCTTCTTGAAGCTGAAGGAAAATTTGGGAGATGAGgttaaaaatgagattttggGGGTTATAAGAGGAATTAAGGATAATTTTAGGCAAATTAGTCAACTGACTAGCGGGGAGAATTTCTCGCCGGGGAGAGCCAAGGGATACTCCATTGCATCGCTCGCTGTATTTCCAGGACAAAGCGAATTGGAGGCTGTGGATTCGAATGAACAGTCGGTGAACTATCAGAAGGATAAGGTTAGGGAGCATCTGGAGAGCGTGGTGGTCGTTGATTATCTGGTGCCACCACCACAAGCTCCGCCTGCGAATCTTTG 809 0.4858 MQCLRICSSFSPSFSHSLSPSKHLLHLKASSSFKPYSHSPPARSSIKMSTQIVEHIVLFKVKDDTEPSKVNSMVNELGALVSLDPVLHLTVGPLLRNRSSSLTFTHMLHSRYKSKDDLNTYSAHPDHVSVVKGSVLPICEDIMAVDWVTEDLQGDLAPAPGSALRVSFLKLKENLGDEVKNEILGVIRGIKDNFRQISQLTSGENFSPGRAKGYSIASLAVFPGQSELEAVDSNEQSVNYQKDKVREHLESVVVVDYLVPPPQAPPANL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00546 269 Gene3D - 159 259 - -
Bva06g00546 269 Gene3D - 44 152 - -
Bva06g00546 269 ProSiteProfiles Stress-response A/B barrel domain profile. 53 147 IPR013097 -
Bva06g00546 269 PANTHER - 36 264 IPR044662 -
Bva06g00546 269 Pfam Stress responsive A/B Barrel Domain 53 148 IPR013097 -
Bva06g00546 269 Pfam Stress responsive A/B Barrel Domain 165 257 IPR013097 -
Bva06g00546 269 ProSiteProfiles Stress-response A/B barrel domain profile. 163 257 IPR013097 -
Bva06g00546 269 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3 36 264 - -
Bva06g00546 269 SUPERFAMILY Dimeric alpha+beta barrel 164 261 IPR011008 -
Bva06g00546 269 SUPERFAMILY Dimeric alpha+beta barrel 51 151 IPR011008 -
Bva06g00546 269 SMART Dabb_2 163 259 IPR013097 -
Bva06g00546 269 SMART Dabb_2 53 149 IPR013097 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00546 - - jcu:105637945 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00546 06 5846560 5847692 Bva06g00546 06 5846560 5847692 ECH