Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00537 ATGTTTGGAATGACAAAGGAAGAAGATTCAGGTAGTCCTAGTTGGGGTGCATCATTTTTTGCACAGACAACAGAGGATGTAGCTAAAGCTGTTGCAGCTGCTGCAAATGCTGTTAACTCTCCAAGGCCGTCAGTGGTCTTTTCCTCAAAAGACAATAACAGTGATAGCCAGCTTCAAAGGCTGCAGTATCAAGTtactaaaatgataaaaggcTTCTCACGCCCTGCTGAAGTTAAAGTTGCAAATTACAATCCTGAAATCCTTACAAGTCTGAAGCGTCAATGGGCAAGCTTTCAGCTGCAATACTTGGACCATAGGTCTTGGAAGGAGCCAACCCGGCTTTTTGAGAGCATGGTGGTTGTTGGACTTCACCCTAATTGTGATATTCAGTCTTTGCAAAGGCAATATGTTGTTAGAAGGTCTGATTCTGGTAAAGTTAGAAGTGCACTCGGTTGTCAGAATCAATCCCGTGTTGAACCCAATTTTGAACCTCAGGTCTTGTTTGTTTATCCTCCAGAAAAACAACTGCCTCTTAAAAGCAAggatcttctttctttctgcttccctGGAGGCCTTGAGgTTCGCGCTGTCGAGAGAACCCCTTCTATGAGTGAGTTGAATGAAATTCTTCTTGCACAGGAGCACCTTAAACAAAGTGACCTGTCATTTGTGTTCAGGTTACAGGGTGCTGATAATTCGACACTGTATGGTTGCTGTGTCTTAGTTGAAGAATTAGTCCACAAGCCCACTGGACTACTTTCCCTTATTTCTGATAAGCAATTGTCTTACTCTCCTTTGAGCCGTTATATATTAACCACACAGAGATGTTACTGCATTCTCTCAAGGCTCCCATTTTTTGATTTGCACTTTGGTGTACTAAACAGCATCTTTACCCAAGAAAGGCTAGAGCGACTGACGAAAAGTATTggagatttaaatttagaacATCCTGAAGGTAATTATGCAGAAGAAATCTCTGAGAGCAATTCAGAGAGTGTGTTGATGAATGATATACCAACAGGGGACGGACTGGATGGAACCCCAATAATTTCCCAGTCAAACTCAATAAGTTCTACACCTGAAACTATTCTAGGTGATGGCAATCACCTGGAGCACCAAATTGTTAATGGGGAGTTGCAGACACCTAAGGAGAGAGTCAATGTTGATGTCAATGTGCCAGTTGATCCCAACATTGATAGGACAACAGCTAAAGGAGAATCTGGTCCAGCAAATTCTGAAGATGGTGATCTTTATGGGGATGATTTTGCAACAAATAAGCAATCTGAAGAAAGGCGTTTACCAAATGCTATTCTGCCACTCCTCCGCTACTGCCAGTATGAAAGCTCCGAATCTTCCTGCAGTTTTCAGGGTTCACCTTGTGAAGACAGAAACTTTAGGAGTGATGTTGATGATACTGAGACAGAAGAGGCATCTATCTCTGGCCAAGAAGATTTAAATGACCTTCTTGATATTCTTGAATGGGCTAAGGCAAATAACCATGGATCATTGCAGATTATAAGTGAGTACTACCGTTTATGTTGCCCTACAAGGGGCTCCACACTTAGGTTTCATCCTTTGGAGCACTTGCATCCTTTGGAATATTATAGACCAGATGAGACAGTTTTAGATCTTGCTGGTTCAATTGTTGATTCGAAGTCTTGCAGTTCGGGTCTGAAATTAATTGAGGCGCATAAAGCACTTCTGGAAGAGGAGGAGGCATCTGCATTGTCTATATGGGCTGTAGCATGCATATGTGGTACCTTGAGACTTGAACATGTGTTAACATTCTTTGCAGGAGCTCTGCTGGAGAAGCAGATAGTTGTTGTTTGTTCTAATTTGGGAATCCTTTCTGCTTCAGTTTTGTCAATCATTCCACTAATCCGGCCTTACCAATGGCAAAGCCTTCTAATGCcgGTTTTACCAAACGACATGCTTGATTTTTTGGATGCTCCTGTCCCATATATAGTTGGTGTCAAGCACAAGACCAATGAAGTGCAGTCAAAGTTAACCAATGCTATTCTTGTTGATGCCAACAAAAACCAGGTTAAGTCACCAACAATACCACAATTGCCAAGACACAGAGAGCTATTATCTTCTTTACGTCCTTATCATGCAAAGCTTGTAGGGGAAAGTTATTTGGGTAGGAAAAGACCTGTGTATGAATGCACAGAAGTGCAGATTGAAGCTGCCAAGGGGTTCCTGTCAGTGTTAAGGTCTTACTTGGATTCTCTTTGCTGTAACATCCGTTCTCACACAATTACTAACGTACAATCCAATGACGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATTGACTCATTCCCTTACCGTGATCGGTCTTTCATGAAGCATTTCGTAGACACCCAACTCTTCTCTGTACAGACAGATcgtcttctttctttcttccagaAGCAATA 2420 0.4058 MFGMTKEEDSGSPSWGASFFAQTTEDVAKAVAAAANAVNSPRPSVVFSSKDNNSDSQLQRLQYQVTKMIKGFSRPAEVKVANYNPEILTSLKRQWASFQLQYLDHRSWKEPTRLFESMVVVGLHPNCDIQSLQRQYVVRRSDSGKVRSALGCQNQSRVEPNFEPQVLFVYPPEKQLPLKSKDLLSFCFPGGLEVRAVERTPSMSELNEILLAQEHLKQSDLSFVFRLQGADNSTLYGCCVLVEELVHKPTGLLSLISDKQLSYSPLSRYILTTQRCYCILSRLPFFDLHFGVLNSIFTQERLERLTKSIGDLNLEHPEGNYAEEISESNSESVLMNDIPTGDGLDGTPIISQSNSISSTPETILGDGNHLEHQIVNGELQTPKERVNVDVNVPVDPNIDRTTAKGESGPANSEDGDLYGDDFATNKQSEERRLPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDVDDTETEEASISGQEDLNDLLDILEWAKANNHGSLQIISEYYRLCCPTRGSTLRFHPLEHLHPLEYYRPDETVLDLAGSIVDSKSCSSGLKLIEAHKALLEEEEASALSIWAVACICGTLRLEHVLTFFAGALLEKQIVVVCSNLGILSASVLSIIPLIRPYQWQSLLMPVLPNDMLDFLDAPVPYIVGVKHKTNEVQSKLTNAILVDANKNQVKSPTIPQLPRHRELLSSLRPYHAKLVGESYLGRKRPVYECTEVQIEAAKGFLSVLRSYLDSLCCNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRSFMKHFVDTQLFSVQTDRLLSFFQKQ 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00537 806 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 805 - -
Bva06g00537 806 Gene3D - 577 742 IPR043153 -
Bva06g00537 806 Pfam DENN (AEX-3) domain 572 679 IPR001194 -
Bva06g00537 806 SMART uDENN_cls 111 243 IPR005113 -
Bva06g00537 806 MobiDBLite consensus disorder prediction 393 418 - -
Bva06g00537 806 Pfam uDENN domain 164 241 IPR005113 -
Bva06g00537 806 SMART DENN_cls 272 680 IPR001194 -
Bva06g00537 806 Gene3D - 103 313 - -
Bva06g00537 806 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 805 - -
Bva06g00537 806 ProSiteProfiles Tripartite DENN domain profile. 144 806 IPR037516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00537 Bva-Chr6 5789027 5798155 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00537 - - gmx:100782148 1237.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01107 05 5704519 5713667 Bva06g00537 06 5789027 5798155 BWGD
Bva06g00537 06 5789027 5798155 Bva06g00537 06 5789027 5798155 ECH