Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00481 ATGAGAACGCCGTCGTTCGGGAGATGCAGCTCCAGCTCCAAAGTGTCTGACTACAGCCTCGAATTCGAATTACCAGAGGATTTTGAGAGGTCGTCACCGCATGGCTGTGGAGTCGGTGGTACAATGTTGCCGATCTTCCTCAGTGATCTCAGAAGAAATCACCATCAAGAGTTGGTTGAGATCACCATGGAGCTCGAGAATGACTCTGTCGTTATCTGCAATGTTGCTCCAAGCACGGCGTCGAATGGCGCTGGAGATGAAGCGGTAGGGAGGAGTCTCTCCTCAATCACGTCGAGAATTCGGAGGAAATTTCCGTGGCTGAAATCATCGTCTTCGAGGACTTCAGCGTCGTCGGACATTGGCGTGGAAGATCCAGTGATACCCGCGCGTAATGCTCGAAGAATCAGAGCTAAACTTGAACGGATGAGATCGAGTGCGCAGAGATCTCTTCAAGGACTCAGATTCATCAGCAAAACCACTGGAGCTACTGAGCAATGGAGAAAGGTTGAAGAGAGGTTCACGTTACTCGCCAAGGACGGTTTACTTGCTAGAGAAGACTTTGGTGAATGCATAGGAATGAAGGATTCAAAGGAGTTTGCGGTGGGAATTTTTGACGCATTGGCAAGAAGGAGGCAACAGAAAGTAACAAAGATTACCAAAGAAGAGCTGTGTGATTTTTGGTTGCAAATTTCGAATCAGAGTTTTGATGCTCGCCTTCAGATTTTCTTTGACatGGCGGACAGCAACAAAGATGGAAGAATCACTCGGGAGGAAGTGCAAGAGCTAATAATGCTTAGTGCTTCCGCGAACAAGTTGTCAAAGCTACAAGAACAAGCTGAAGGATACGCTGCGTTGATAATGGAAGAGTTAGATCCAGAAGACCTGGGATATATTGAGTTATGGCAGTTAGAAATGTTGCTCCTACAGAAAGATAGGTACATGAAGTACAGCAGAGAACTCAGCACCACAAGTACCGGATGGAGTCAGAATGTGACAAGCTCAAGGCCCAAATATGTGATCCCAAGAGCTTGCAGGGCTCTCAGGTGTCTCGTCCTGGAACATTGGCGGAGGTGTTGGATCTTTATATTGTGGTTCGTTGCCATTGCTTGCCTTTTTACCTGGAAATTTTATCAGTATCAAAACAGGACAGCTTTTCAAGTAATGAGCTACTGCTTACCAATAGCCAAAGGTGCAGCGGAGACTCTGAAGCTCAACATGGCTCTCATTCTTTTACCAGTTTGTCGAAACACATTGACTTGGCTTCGTTCTACAAGAGCCAGGTCATTTGTCGCCTTCGATGACAATATTAATTTCCACAAGATAATTGCATGTGCTATAGCTATTGGAATCGTTGTTCATGCAGGCAATCATCTGGCTTGCGATTTTCCCCTTCTCGTAAATTCGTCTCCAGAACAATTTACGCTGgtttcttcatattttcataacaAGAAACCCACGTATGGAACGCTTGTAACTGGTGTTGAAGGCCTAACAGGAATCTCAATGGTCGCGTTAATGGCAATCTCTTTCACATTAGCAACCCGTCATTTTCGGAGAAACGCAGTCAGGCTTCCAGCACCCTTCAACAGATTGACGGGCTTTAATGCATTCTGGTACTCACACCACCTTCTTGGTCTTGTCTACGTTTTGCTCTTCGTCCATGGATCTTGCTTGTACTTGACCCACCAGTGGTATCAAAAAACTacgTGGATGTACATCTCTGTTCCATTGTTGCTGTACACAGCAGAGCGTACTCTAAGAATGTGCAGATCAGAACATTATTCAGTAAAAATACTAAAGGTTTCAGTGCTACCAGGAAACGTCTTCAGCTTAATCATGTCTAAGCCGAACGGATTTAGGTACAAAAGTGGacagtatatatttttgaagtgcCCAAAAATCTCCCCATTTGAGTGGCACCCATTCTCCATCACTTCGGCCCCGGGAGACGACTGCTTGAGTGTTCACATTCGAACAGTGGGAGATTGGACGCAAGCATTGAAGCAACTTTTCACTGAAGATGATAGATTACCTACTGTAACTAGTCGAGccaaatttggtcaacttatGCAAATGGATCAAAAAGGACATCCCAAACTGCTTGTTGATGGCCCATATGGAGCTCCAGCACAGGATTATCAGAATTATGACGTATTGCTCCTTGTAGGATTAGGAATCGGAGCTACTCCTTTCATTAGTATTCTCAAAGATCTTCTAAATGATGCAAGAAAAATCGATGATCAAACGGAGGTAATCacagaaacaacaaaatcagATGGGAGCTTCAATAGTTTTACATCTTCAAACATAGGTCGAAACAAGAGATTGCCAAGGGCTTATTTCTATTGGGTTACCAGGGAACCTGGATCTTTTGAATGGTTCAAAGGAGTCATGGACGAAGTTGCAGAAATGGATCACAAAGGTCAAATTGAGCTTCACAACTACCTAACAAGCGTTTACGAGGAGGAGGACGCAAGGTCGACTCTTCTCACCATGGTCCAAGCTCTGAACCATGCCAAACATGGTGTGGACATCTTATCAGGAACTCCAGTGAAAACACACTTTGCTAGGCCTAATTGGAGAGAAGTTTTCACCAAGATAGCCTCTAAACATCCGTCTTCAACAGTAGGAGTGTTTTATTGCGGAATGCCCATGCTGGCAAAGGAGCTAAAGAAGCTATCACACGAACTAAGTCACAAGACAACTACACGCTTTGACTTTCACAAGGAGTACTTCTG 2738 0.4361 MRTPSFGRCSSSSKVSDYSLEFELPEDFERSSPHGCGVGGTMLPIFLSDLRRNHHQELVEITMELENDSVVICNVAPSTASNGAGDEAVGRSLSSITSRIRRKFPWLKSSSSRTSASSDIGVEDPVIPARNARRIRAKLERMRSSAQRSLQGLRFISKTTGATEQWRKVEERFTLLAKDGLLAREDFGECIGMKDSKEFAVGIFDALARRRQQKVTKITKEELCDFWLQISNQSFDARLQIFFDMADSNKDGRITREEVQELIMLSASANKLSKLQEQAEGYAALIMEELDPEDLGYIELWQLEMLLLQKDRYMKYSRELSTTSTGWSQNVTSSRPKYVIPRACRALRCLVLEHWRRCWIFILWFVAIACLFTWKFYQYQNRTAFQVMSYCLPIAKGAAETLKLNMALILLPVCRNTLTWLRSTRARSFVAFDDNINFHKIIACAIAIGIVVHAGNHLACDFPLLVNSSPEQFTLVSSYFHNKKPTYGTLVTGVEGLTGISMVALMAISFTLATRHFRRNAVRLPAPFNRLTGFNAFWYSHHLLGLVYVLLFVHGSCLYLTHQWYQKTTWMYISVPLLLYTAERTLRMCRSEHYSVKILKVSVLPGNVFSLIMSKPNGFRYKSGQYIFLKCPKISPFEWHPFSITSAPGDDCLSVHIRTVGDWTQALKQLFTEDDRLPTVTSRAKFGQLMQMDQKGHPKLLVDGPYGAPAQDYQNYDVLLLVGLGIGATPFISILKDLLNDARKIDDQTEVITETTKSDGSFNSFTSSNIGRNKRLPRAYFYWVTREPGSFEWFKGVMDEVAEMDHKGQIELHNYLTSVYEEEDARSTLLTMVQALNHAKHGVDILSGTPVKTHFARPNWREVFTKIASKHPSSTVGVFYCGMPMLAKELKKLSHELSHKTTTRFDFHKEYF 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00481 912 ProSitePatterns EF-hand calcium-binding domain. 247 259 IPR018247 -
Bva06g00481 912 SUPERFAMILY EF-hand 163 325 IPR011992 -
Bva06g00481 912 ProSiteProfiles EF-hand calcium-binding domain profile. 234 269 IPR002048 GO:0005509
Bva06g00481 912 SUPERFAMILY Riboflavin synthase domain-like 594 709 IPR017938 -
Bva06g00481 912 Gene3D Translation factors 580 679 - -
Bva06g00481 912 CDD NOX_Duox_like_FAD_NADP 598 820 - -
Bva06g00481 912 PRINTS Cytochrome B-245 heavy chain signature 442 460 IPR000778 GO:0016020|GO:0016491
Bva06g00481 912 PRINTS Cytochrome B-245 heavy chain signature 534 554 IPR000778 GO:0016020|GO:0016491
Bva06g00481 912 PRINTS Cytochrome B-245 heavy chain signature 721 738 IPR000778 GO:0016020|GO:0016491
Bva06g00481 912 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 591 712 IPR017927 GO:0016491
Bva06g00481 912 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 713 912 IPR039261 -
Bva06g00481 912 CDD EFh 217 264 IPR002048 GO:0005509
Bva06g00481 912 Pfam Respiratory burst NADPH oxidase 138 237 IPR013623 GO:0004601|GO:0050664
Bva06g00481 912 PANTHER RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E 47 912 - -
Bva06g00481 912 Pfam FAD-binding domain 594 709 IPR013112 GO:0016491
Bva06g00481 912 PANTHER NADPH OXIDASE 47 912 - -
Bva06g00481 912 Gene3D - 139 255 - -
Bva06g00481 912 Pfam Ferric reductase like transmembrane component 397 551 IPR013130 -
Bva06g00481 912 Pfam Ferric reductase NAD binding domain 716 894 IPR013121 GO:0016491
Bva06g00481 912 Gene3D - 707 912 IPR039261 -
Bva06g00481 912 SFLD NADPH oxidase subgroup (NOX) 136 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00481 Bva-Chr6 5508689 5516907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00481 31 912 Miscellaneous Gene Families AT1G19230 63.062 0.0 1174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00481 K13447 - gmx:100796455 1412.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00481 06 5508689 5516907 Bva06g00481 06 5508689 5516907 ECH