Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00449 ATGTCTGCTTCTTCAATTTCGTTCCTTCATTGTGCATTACCCTTTTCCCAGCAGTCATGGATGGGCACTAAGCTTGCGGCTACTCCAACTGCAATTTCAAGGTCAAATTCGAGCCCCTCAATTTCTCTTGTGGTTGAAGCCACGACCAGAAGAGAAGACAGGACTGCTCGCCATGTCCGCATCAGAAAGAAGGTTGAAGGGACACCAGAAAGACCAAGGTTGTCTGTCTTCCGATCCAACAAGCATATCTATGTCCAGGTGATTGATGACACCAATATGCACACACTTGCATCAGCTTCAACAATGCAGAAACCACTTTCAGAAGAGTGTGACTATACTTCTGGTCCCACCATTGAAGTAGCAAAGAGGATGGGTGAACTAATAGCAAAGTCCTGCTTAGAGAAAGGGATCACAAAGGTGGCCTTTGACCGAGGTGGATACCCATACCATGGCCGTGTTCAAGCTCTTGCAGACGCAGCCCGTGAACATGGCCTGGACTTCTA 503 0.4771 MSASSISFLHCALPFSQQSWMGTKLAATPTAISRSNSSPSISLVVEATTRREDRTARHVRIRKKVEGTPERPRLSVFRSNKHIYVQVIDDTNMHTLASASTMQKPLSEECDYTSGPTIEVAKRMGELIAKSCLEKGITKVAFDRGGYPYHGRVQALADAAREHGLDF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00449 167 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 49 167 IPR005484 GO:0003735|GO:0005840|GO:0006412
Bva06g00449 167 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 26 167 IPR005484 GO:0003735|GO:0005840|GO:0006412
Bva06g00449 167 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 26 167 - -
Bva06g00449 167 CDD Ribosomal_L18_L5e 61 165 - -
Bva06g00449 167 TIGRFAM L18_bact: ribosomal protein uL18 51 167 IPR004389 GO:0003735|GO:0005840|GO:0006412
Bva06g00449 167 Hamap 50S ribosomal protein L18 [rplR]. 49 167 IPR004389 GO:0003735|GO:0005840|GO:0006412
Bva06g00449 167 SUPERFAMILY Translational machinery components 50 165 - -
Bva06g00449 167 Gene3D - 48 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00449 Bva-Chr6 5291433 5294005 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00449 K02881 - nnu:104587972 240.35