Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00437 ATGGCGGAACCTAATGTGGTGGAAACTAAGGATGGAACTGTTTCAGTTTCCTCTGCATTTGCTGGTCACCAGGAAGCTGTACAGGATAGAGACcacaaatttttaagaaaagcagTTGATGAAGCATATAAAGGAGTAGAATGTGGAGATGGAGGCCCTTTTGGTGCTGTAATAGTATGTAATGATGAAGTAGTTGCCAGTTGTCACAACATGGTTTTGAAGAAGACAGACCCAACTGCCCATGCAGAGGTGACTGCAATAAGAGAGGCTTGTAAGAACCTCAAACAGATAGAACTTTCTAATTGTGAAATATACGCTTCTTGTGAGCCTTGCCCAATGTGCTTTGGTGCTATCCACCTTTCACGAATCAAGAGGTTGGTGTATGGTGCAAAGGCTGAGGCAGCTATTGCTATTGGGTTCGACGATTTTATTGCAGATGCATTGCGAGGAACTGGATTCTATCAGAAAGCGTCACTGGAGATTAAGAGAGCTGATGGCAATGAGGCTATCATTGCTGAAGAGGTGTTTCAGAAGACAAAGGAAAAATTCCAAATGTACTA 560 0.4161 MAEPNVVETKDGTVSVSSAFAGHQEAVQDRDHKFLRKAVDEAYKGVECGDGGPFGAVIVCNDEVVASCHNMVLKKTDPTAHAEVTAIREACKNLKQIELSNCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKASLEIKRADGNEAIIAEEVFQKTKEKFQMY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00437 186 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 30 129 IPR002125 -
Bva06g00437 186 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1 185 - -
Bva06g00437 186 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Bva06g00437 186 Gene3D Cytidine Deaminase, domain 2 30 186 - -
Bva06g00437 186 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
Bva06g00437 186 CDD nucleoside_deaminase 35 142 - -
Bva06g00437 186 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 185 - -
Bva06g00437 186 SUPERFAMILY Cytidine deaminase-like 24 144 IPR016193 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00437 Bva-Chr6 5232197 5235058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00437 - - cam:101506670 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01194 05 6193731 6196734 Bva06g00437 06 5232197 5235058 BWGD