Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00435 ATGGACCTCAAATCTCTACTTGTTGTGATATGTCTGTGGGCCTGCTCCGGATCACTGGCTTTCACAACTTCTGATGACGGGCTATTGAGAGTTAGGCTAAAAAAGAGAACTTTAGACGTTAACAGTCTAAATGCTGCAAGAATTAAGGAAGTAATTCATCCCGGAGGTCTAGGGATTGTTAATAACAATCgtttaaatgatttaaaaacaGATGTGGTGTACTTAAAGAACTATCTTGATGCACAATATTATGGGGAGATTAGTATAGGTTCGCCTCCGCAAACCTTCAATGTTGTGTTTGACACTGGAAGCTCCAATCTTTGGGTTCCATCTTCCAAATGCATCTTGTCTATTGCTTGCTATTTTCATTCCAAGTATAGGTCAAGGCTGTCTAGCACCTATACCAAAATTGGAATATCTTGCAAAATTCCATATGGTCGTGGATACATTTCTGGCTTCTTCAGCCAAGATCATGTACAAGTTGGGAATATCATCATCAAAAATCAAGAATTTGCTGAGATCAAAAAGGAAGGTTCTTTGGCTTTTTTAGCTATGCAATTTGATGGGATACTTGGACTTGGATTCCGGGATATTTCAGTTGGACAAGCCACACCAGTGTGGTACAATATGATACAACAAAAATGGATAgataaacaaattttctcGTTTTGGCTGAATCGAGACCCCATGGCAAAGATAGGGGGTGAGATTGTCTTTGGTGGTATTGACTGGACGCACTTTAGGGGTGACCACACTTATGTCCCGATATCTCGAAATGGTTACTGGCAGATTGTGATGGGAGATGTTCTAGTTGCAGAAAATTCTACAGAATTATGCAAGGATGGCTGTGCTGCCATCGTGGACTCAGGGACATCCTTAATTGCCGGTCCAACTACTGTTGTGACTCAAATTAACCATGCCATTGGAGCAGCAGGATATGCTAGTTTTGAATGTAAAAATGTCATCCATAACTATGGGAATAAGATATGGGAATTGTTAACTGCTAGGTTAAGACCAGAAATTATATGCGTTGAAATTGGGCTATGttcaccaaaacaaaatggCTCTGATAAAATGGACAATATTATCGAAACAGCGGTGCACAACAAAAGTTGGGATGGATCATTAACCAAGGACAGCCCCCTATGCACTTTCTGTGACATGATTATCTTTTGGATTCAAGTTGAGCTTAAGCAAAAGAATGcgaaggaaaaaatatttaagtacgTGGATGAGCTGTGCCAGAAGCTTCCTGATCCAATGGCACAGTCATTTGTAGACTGTAATAGAATTGCTGCTATGCCATCTATTTCGTTCACGCTTGGAAACAAATCATTTCCCCTCTCTCCACATCAGTATATCCTAAGAGTTGAAGAAGGTTGCTCCACTGTCTGCTACAGTAGTTTTGTTGCTCTTGATGTGCCTACTCTACAAGGTCCCCTCTGGGTATTAGGAGATACTTTCATGGGAGCATACCACACAGTGTTCGACTTTGGCAATCTCCGTATAGGATTTGCAGATACTGCATA 1529 0.3924 MDLKSLLVVICLWACSGSLAFTTSDDGLLRVRLKKRTLDVNSLNAARIKEVIHPGGLGIVNNNRLNDLKTDVVYLKNYLDAQYYGEISIGSPPQTFNVVFDTGSSNLWVPSSKCILSIACYFHSKYRSRLSSTYTKIGISCKIPYGRGYISGFFSQDHVQVGNIIIKNQEFAEIKKEGSLAFLAMQFDGILGLGFRDISVGQATPVWYNMIQQKWIDKQIFSFWLNRDPMAKIGGEIVFGGIDWTHFRGDHTYVPISRNGYWQIVMGDVLVAENSTELCKDGCAAIVDSGTSLIAGPTTVVTQINHAIGAAGYASFECKNVIHNYGNKIWELLTARLRPEIICVEIGLCSPKQNGSDKMDNIIETAVHNKSWDGSLTKDSPLCTFCDMIIFWIQVELKQKNAKEKIFKYVDELCQKLPDPMAQSFVDCNRIAAMPSISFTLGNKSFPLSPHQYILRVEEGCSTVCYSSFVALDVPTLQGPLWVLGDTFMGAYHTVFDFGNLRIGFADTA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00435 509 Gene3D Acid Proteases 29 241 IPR021109 -
Bva06g00435 509 ProSiteProfiles Peptidase family A1 domain profile. 83 506 IPR033121 -
Bva06g00435 509 Pfam Eukaryotic aspartyl protease 82 507 IPR033121 -
Bva06g00435 509 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 5 509 - -
Bva06g00435 509 Gene3D Acid Proteases 242 509 IPR021109 -
Bva06g00435 509 Pfam Saposin-like type B, region 1 381 418 IPR007856 GO:0006629
Bva06g00435 509 Gene3D - 313 418 - -
Bva06g00435 509 SUPERFAMILY Saposin 317 418 IPR011001 -
Bva06g00435 509 PRINTS Pepsin (A1) aspartic protease family signature 285 296 IPR001461 GO:0004190|GO:0006508
Bva06g00435 509 PRINTS Pepsin (A1) aspartic protease family signature 482 497 IPR001461 GO:0004190|GO:0006508
Bva06g00435 509 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Bva06g00435 509 PRINTS Pepsin (A1) aspartic protease family signature 235 248 IPR001461 GO:0004190|GO:0006508
Bva06g00435 509 Pfam Saposin-like type B, region 2 317 349 IPR008138 -
Bva06g00435 509 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 98 109 IPR001969 GO:0004190|GO:0006508
Bva06g00435 509 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 5 509 IPR001461 GO:0004190|GO:0006508
Bva06g00435 509 ProSiteProfiles Saposin B type domain profile. 379 420 IPR008139 -
Bva06g00435 509 SUPERFAMILY Acid proteases 5 507 IPR021109 -
Bva06g00435 509 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 285 296 IPR001969 GO:0004190|GO:0006508
Bva06g00435 509 ProSiteProfiles Saposin B type domain profile. 313 353 IPR008139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00435 Bva-Chr6 5221298 5225083 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00435 K08245 - gmx:100793160 755.362