Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00292 ATGATACTTTGCTCTATggcttctttctcttcaaagGCTACTCTCCTTCTTCTACTGGGACTCTTGACGGTCAACCTTCCCATCACAGATGCTCAAATAGGCGTTTGCTATGGTATGCTGGGCAATCTCCCATCAGCAGGTGAAGTTATCAGTCTTTATCAGTCAAACAACATCTGGCGGATGAGGCTATACGATCCAAATCAACCTGCTCTAGAAGCTCTCAGAAACTCCGGCATCGAACTCATGCTGGGTGTGCCCAACTCCGATCTCCAAAGCCTCGCAACCAACCCAGACAATGCACGCCAATGGGTCCAAAGAAACGTTCTCAACTTCTGGCCCAGCGTCAAAATCAAGTACATTGCCGTCGGCAACGAAGTCAGCCCAGTTAATGGCGCCACCGCTTGGTTTGCCCAATTTGTCCTTCCAGCCATCCAAAACGTGTACCAAGCTATAAGAGCCAGAGGCCTACACGACCAAATCAAGGTCTCAACAGCCATTGACATGGGCCTGCTCGGAAACTCCTATCCACCATCACAGAGTTACTTCAGAGGCGACGTGAGATCTTACTTGGACCCCATCATAGGCTACTTGGTCTACGCAAATGCACCACTGCTAACCAATGTTTACCCTTATTTTGCCTATGCGGGTAACCCACGTGACATTTCTCTTGATTATGCTCTCTTTATCTCCCCTAGTGTTCTGGTGTGGGATGGCCAGTATGGGTACCAGAACCTGTTTGATGCTATGCTGGACGCGGTGCACGCCGCCATTGATAACACTGGAATTGGTTATGTGGAGGTGGTGGTTTCGGAGAGTGGGTGGCCGTCCGATGGTGCATTTGCGGCAACGTATGATAATGCACGGGTGTACCTTGATAATTTGGTTCGTCATGTGGGTAGGGGTACCCCGAGGAGGCCTTCGAAGGCAACGGAGACTTACCTGTTTGCCATGTTTGACGAGAACTGGAAGGAGCCTGAGTTGGAGAAACATTTTGGACTTTTTTACCCTGACAAGCGAAAGAAGTACCCGTTCGGCTTTGGGGGAGGAAGGAAATGGGAAGTTGCTGCTTATAATCCGTTCAATGCAACGGTTCCACTTAAAAGTGACGTGTA 1112 0.4874 MILCSMASFSSKATLLLLLGLLTVNLPITDAQIGVCYGMLGNLPSAGEVISLYQSNNIWRMRLYDPNQPALEALRNSGIELMLGVPNSDLQSLATNPDNARQWVQRNVLNFWPSVKIKYIAVGNEVSPVNGATAWFAQFVLPAIQNVYQAIRARGLHDQIKVSTAIDMGLLGNSYPPSQSYFRGDVRSYLDPIIGYLVYANAPLLTNVYPYFAYAGNPRDISLDYALFISPSVLVWDGQYGYQNLFDAMLDAVHAAIDNTGIGYVEVVVSESGWPSDGAFAATYDNARVYLDNLVRHVGRGTPRRPSKATETYLFAMFDENWKEPELEKHFGLFYPDKRKKYPFGFGGGRKWEVAAYNPFNATVPLKSDV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00292 370 ProSitePatterns Glycosyl hydrolases family 17 signature. 265 278 IPR000490 GO:0004553|GO:0005975
Bva06g00292 370 Pfam Glycosyl hydrolases family 17 33 344 IPR000490 GO:0004553|GO:0005975
Bva06g00292 370 Gene3D Glycosidases 32 347 - -
Bva06g00292 370 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 353 IPR044965 GO:0004553|GO:0005975
Bva06g00292 370 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 23 353 - -
Bva06g00292 370 SUPERFAMILY (Trans)glycosidases 33 344 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00292 Bva-Chr6 4424997 4426413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00292 39 350 Glycoside Hydrolase AT4G16260 61.905 1.79e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00292 - - gmx:100801599 578.941