Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00291 ATGAGGAATATGGCTTTGCAGAAATATGTTCCCTCTGGTGATGCACCTACTGTGAATATGAAACATTTGACCATTTCCAGTAAGGCGCATGGGAAAACTCAGCTTGAGGTGGCAGGCCAGAGTCATGCTGTGGATGTGGATATTGACCTTAGAgaagtttattttctcatcatGCATTTCCTTTCAGCTGGGCCATGTCGTAGAACTTGTGTACAGTTTTGGAATGAACTTCTTGAGCACCAACTTTTACCTAGAAGGTATCATGCTTGGTATTCAAGGAGTGGGGCACCTAGTGgagatgaaaatgatgatggCCTGTCATTCCCTCTAAGTTACAATAACTTGGTGGAGAggTATCCTCACATTGAAAAGGACCACTTGGTAAAGCTTTTGAAGCAATTGATGTTAAATACAGCTCCACCATTGCTAGGCATGAGTGTTGGAAATGCTCCAAGTGCAGCTGATGTACCTACTCTTTTGGGAACGGGTTCATTTTCCCTTTTGAGCTaTAACAGGGATAAAATGAATGAAGAAGTCAAACGACCACCTCCTTACATGCGCTGGCCTCATATGAAAGCCAATCAGGTTCATGGACTGAATTTAAGGGAAATTGGGGGTGGTTTTCCTAGACACCATCGTGCTCCATCTGTACGTGCTGCATGCTATGCTATTGCGAAACCTTCAACCATGGTACAGAAGATGCAAAATATCAAGAGGCTAAGAGGACACCGTAATGCTGTCTATTGTGCTATATTTGACCGGTCAGGGAGATATGTCATTACAGGTTCAGATGATCGACTTGTAAAAATTTGGTCTATGGAAACAGCATATTGTTTGGCCAGTTGCCGCGGGCATGATGGTGACATCACTGACTTGGCTGTGAGCTCAAATAACGCTTTAGTTGCATCCTCTTCTAATGACTGTATCATTCGAGTTTGGCGCTTGCCAGATGGCTTACCAATATCAGTTTTGCGGGGACATACTGGAGCTGTTACTGCCATAGCATTTAGTCCCAGACCTGGTGCTATATATCAGCTTCTGTCGTCCGCAGATGATGGAACTTGTAGGATATGGGATGCGAGGCATTCCCAGTCAACTCCAAGAATATATGTTCCAAGGCCTTCTGATTCTGTTAATGGGAAGAGCAGTGTCCCATCTTCAAGTACTACTCCTCAGAGCCATCAGATTTTTTGTTGTGCATTTAATGCTAATGGAACTGTCTTTGTTACTGGTAGCTCAGACCATATGGCCAGGGTCTGGAATGCTTGTAAACTGAGCGTGGATGACTCTGACCAACCCAATCATGAGATAGATGTGCTATCTGGGCATGAAAATGATGTAAACTATGTGCAATTTAGTGGATGTGCAGTAGCATCTCGATTTTCCACAGCAGACACGTGGAAGGAGGAAAAtgttccaaaatttaaaaactccTGGTTCAATCATGAAAATATAGTTACCTGCTCTCGTGATGGGAGTGCTATTATATGGATTTCAAAATCACGCAGGTCACATGGGAAAACTGGTCGCTGGACACGGGCGTATCATCTTCGAGTTCCACCTCCGCCGATGCCACCTCAACCACAACGAGGTGGTCCTCGTCAGAGAATTCTACCGACACCTCGGGGTGTAAATATGATTGTTTGGAGCCTAGATAATCGCTTTGTCCTTGCAGCTATTATGGATTGCAGGATTTGTGTTTGGAATGCTGCTGATGGTAGCTTAGTGCACTCGTTAACTGGCCATACTGAATCTaCATACGTTCTGGATGTTCATCCATTTAATCCCCGGATAGCTATGAGTGCGGGATATGATGGAAGAACCATTGTGTGGGATataTGGGAAGGCATACCTATCTGGCTATATGAGATGTCACGTTTCAAGTTGGTGGATGGAAAGTTTTCACCAGATGGGACATCTATTATACTTTCAGACGATGTTggtcaactatatatattaaacacGGGTCAAGGTGAATGGCAGAAAGATGCCAAGTATGATCAGTTCTTCCTTGGTGATTATCGCCCCCTCATTCAAGATACCCATGGTAATGTACTTGACCAGGAAACTCAGCTTGCTCCATATCGACGGAACATGCAAGATTTGCTTTGTGATTCAGCAATGATACCATACCCAGAACCTTATCAGAGTGAATATCAACAAAGACGTTTAGGAGCTTTGGGCATTGAGTGGCGTCCTTCATCACTAAAGCTTGCTGTTGGTCCTGACTTCAGTCGTGACCCAGATTTTCAGATGCTTCCATTGGCAGACTTGGATATATTGTTTGAACCACTGCCAGAGTTTATAGATGCCATGGATTGGGAACCAGAAAACCAAGTGCATAGTGATGATACAGATTCAGAATATAATGTTACTGAAGATTATTCTTCGGGGGGGGAGAAGGGATGCTCAAGCTCCAGCGTCTCTGGTGATCCTGTGTGCAGCACAGATGACAGTGAGGGGGGGGATGCTCACATGGATGGAATTCGTagatcaaaaaggaaaaaacataAACTTGAAaCTGAGGTCATGACTTCTTCTGGGAGACGTGTAAAAAGAAGGAATTTGGATGAGTGTGATAGCTTCACAAGTAACCGAAgtaggaaaggaaaaagtggCCGAAAAGTGTCAAAGAAGAAATCTTCTAAGTCGAAATCTTCAAGACCTCAAAGAGTTGCTGCACGCAATGCCctacatttattttctaaaataacaGGTACACCAACAGatggagaagaagaggatAGCTTGGATGGTGATTTTTCAGATAGTGAATCAACAATACAAGAATCGAATTTTGATAGTGATGAATCTGGTAGAGATTTGGAGAATGATatactaaaatattcaaaaggaaaagaagtatCGATAGATGAATCTGAGGACTTGAAATCTCATGAACCTCCTGAGCCTCATATAAATGCAATGAACAGGAGGAGATTAGTTCTCAAGTTGCCAGTTCGAGATTCATCTAAGTCTCTGCTGGACTCAACTCTGCATAAGTTTGACAATCAGGCTGATTTGGTTGCTTCATCATCAAAAACTGCTCAGGAAACTAATCAAAACCACTCTATGATTGAAGGAACTggtcaagtaaaattagacccGTTAAAGGATCATGTTGACCTGTTTGATGGCTACATGAAAGGGAAAATCAGATGGGGAGTGGTTAGAGCTCGTACATCTAAACGTCCCAGAGTGGGAGAAACCATGCCATCAGATAAAAATTCCAGATCTCTAATATGTTTGAACAATCTAAATGAGGAGGACAATGTTGGCACTGGGCATGAGAATCCTTTAGAAATCCAAAATAATGAGGATAAGGTAGATAGtgtgaaaaaattaacaaatgacAATGCTGCTACTACCTCAGAGGCCTTTAATGCTGCTGAGAATGGTAAAGGGCTCAGTACTTCCAGCAAATATAGGGATCAAAATGAATCAATCTTTGATTGCATGGAGGTTCAGGACTCAAATGCTGCTTCTACCAGCCATAGTAGCGGGGCTGATCAACTCCCTGAACAAATTGGTTTCCCTcctatttcaatttcaactaaGTTAAGGTCTAAAAGGAGTTCAAGGGATGCTGAAAGTCCATCCAAGTATGAAGCAAAATCTTCAGTGGTAAAAAATAGTTCATGTAGCCCTGACATAAATATTTTGGACAAAGAACAGAGAATGATGGTGGCTGAGGATGAGAACGCTGCTAGAGCTAATTTAAACCAGGGAGaaacaaaagaggaaaatgCCCGGACtgacaaaaatattacttcACATGATTTACTTGAGCAGGAATCTCATAGAGACAAAATGTATAGAGCTGTTTATAGACGATCAAGATCAAATAGGGCTATGACTAAGTCAGGTGACGTTGGTGGCCTGGGAGAATCCACATCGAATGGGGGCCTTGGAGAGTCTACTTCAAATGGTAGCAACAATAATCATGATGCAGCAGTAGACTTCACTAATGTTAGAAATGATTGTGGTCATACCATGGAGTTGGAAGCAACCTTTATTGATCCAAAAAACATGCAGAGTACTCCAGAAGCGCAACAAGGATTTGACTACCTTGCAACTGGAAGTTCCCAGAATGCTTCCAAGAACAGAGAACAGCCCACAGAAGAAAGGGGTTCTAGTTTAAAATTGACTGTGGGTTTGAGATCCACTAGAAGCCGGAGAGCTAGTTATCATGTCCGTGAGACTAGTCCAGTAAACAGAAGGAAGTCACATCAATCAGCTTCTAAAGCATCATGGTTGTTGTTATCAACACATGAGGAAGGGTGCAGATATATTCCACAAGAAGGAGACGAGGTCGTATATTTGAGACAGgGACACCAGGAGTATATAGATTATAGTGGTGTAAAAGAATTCGGTCCTTGGACATCACTGAAGGGACAAATAAGAGCTGTAGAATATTGTAAAGTTCAAAGCCTCGAGTATTCTACAGTTTCATCTGGTGATAGCTGCTGCAAAATGACCCTTCAGTTTGTAGATCCTGATTCAAGTGTGGTTGGAAGATCTTTTAAGTTGACTCTCCCTGAAGTGACTGGTTTCCCagattttcttgttgaaaGAATTAGATTTGACGCTGCTATCCAAAGAAATTGGACACACAGGGATAAATGCAGGGTCTGGtggaaaaatgagaatgatatCGATGGTAATTGGTGGGAAGGTCGAATACTGTGTGTAAAACCCAAATCTCCCGAATTTCCAGACAGTCCATGGGAGACGTATACAGTTCAATACAAGACTGACCCCACTGAAACACATTTACATAGTCCTTGGGAGCTTTTTGATGCTGATACTCAATGGGAACAGCCTCATATTGATGATGAGACCAGAAATAAGCTTTTATCTGCCTTTACGAAATTGCAGCAGTCGAGTAACACTGTTCAGGATCGTTATGGGGTCCAAGAATTGATGAAAGCTTCAACTAAgccaaaatttattaacagGTTTGTCGTTCCTCTGACTATTGGATTGATACAGTCAAGGTTGGAGAACAATTACTACCGGACTTTGGAGGCACTTAAGTATGATATGACAGTTGTGCTATCTAAtggcttttctttctttgaaaagaatgagaagatATCGTCAAAATTGAAACGCCTATCAGACTGGTTCACACGGACCTTATCAGCTTTCTA 5153 0.3986 MRNMALQKYVPSGDAPTVNMKHLTISSKAHGKTQLEVAGQSHAVDVDIDLREVYFLIMHFLSAGPCRRTCVQFWNELLEHQLLPRRYHAWYSRSGAPSGDENDDGLSFPLSYNNLVERYPHIEKDHLVKLLKQLMLNTAPPLLGMSVGNAPSAADVPTLLGTGSFSLLSYNRDKMNEEVKRPPPYMRWPHMKANQVHGLNLREIGGGFPRHHRAPSVRAACYAIAKPSTMVQKMQNIKRLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDLAVSSNNALVASSSNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPGAIYQLLSSADDGTCRIWDARHSQSTPRIYVPRPSDSVNGKSSVPSSSTTPQSHQIFCCAFNANGTVFVTGSSDHMARVWNACKLSVDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSTADTWKEENVPKFKNSWFNHENIVTCSRDGSAIIWISKSRRSHGKTGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGIPIWLYEMSRFKLVDGKFSPDGTSIILSDDVGQLYILNTGQGEWQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQLAPYRRNMQDLLCDSAMIPYPEPYQSEYQQRRLGALGIEWRPSSLKLAVGPDFSRDPDFQMLPLADLDILFEPLPEFIDAMDWEPENQVHSDDTDSEYNVTEDYSSGGEKGCSSSSVSGDPVCSTDDSEGGDAHMDGIRRSKRKKHKLETEVMTSSGRRVKRRNLDECDSFTSNRSRKGKSGRKVSKKKSSKSKSSRPQRVAARNALHLFSKITGTPTDGEEEDSLDGDFSDSESTIQESNFDSDESGRDLENDILKYSKGKEVSIDESEDLKSHEPPEPHINAMNRRRLVLKLPVRDSSKSLLDSTLHKFDNQADLVASSSKTAQETNQNHSMIEGTGQVKLDPLKDHVDLFDGYMKGKIRWGVVRARTSKRPRVGETMPSDKNSRSLICLNNLNEEDNVGTGHENPLEIQNNEDKVDSVKKLTNDNAATTSEAFNAAENGKGLSTSSKYRDQNESIFDCMEVQDSNAASTSHSSGADQLPEQIGFPPISISTKLRSKRSSRDAESPSKYEAKSSVVKNSSCSPDINILDKEQRMMVAEDENAARANLNQGETKEENARTDKNITSHDLLEQESHRDKMYRAVYRRSRSNRAMTKSGDVGGLGESTSNGGLGESTSNGSNNNHDAAVDFTNVRNDCGHTMELEATFIDPKNMQSTPEAQQGFDYLATGSSQNASKNREQPTEERGSSLKLTVGLRSTRSRRASYHVRETSPVNRRKSHQSASKASWLLLSTHEEGCRYIPQEGDEVVYLRQGHQEYIDYSGVKEFGPWTSLKGQIRAVEYCKVQSLEYSTVSSGDSCCKMTLQFVDPDSSVVGRSFKLTLPEVTGFPDFLVERIRFDAAIQRNWTHRDKCRVWWKNENDIDGNWWEGRILCVKPKSPEFPDSPWETYTVQYKTDPTETHLHSPWELFDADTQWEQPHIDDETRNKLLSAFTKLQQSSNTVQDRYGVQELMKASTKPKFINRFVVPLTIGLIQSRLENNYYRTLEALKYDMTVVLSNGFSFFEKNEKISSKLKRLSDWFTRTLSAF 1717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00291 1717 MobiDBLite consensus disorder prediction 791 814 - -
Bva06g00291 1717 Gene3D - 1610 1717 IPR036427 GO:0005515
Bva06g00291 1717 MobiDBLite consensus disorder prediction 1360 1379 - -
Bva06g00291 1717 MobiDBLite consensus disorder prediction 1281 1314 - -
Bva06g00291 1717 Gene3D - 211 386 IPR015943 GO:0005515
Bva06g00291 1717 SUPERFAMILY WD40 repeat-like 231 658 IPR036322 GO:0005515
Bva06g00291 1717 MobiDBLite consensus disorder prediction 934 972 - -
Bva06g00291 1717 PANTHER PH-INTERACTING PROTEIN-LIKE ISOFORM X1 23 1716 - -
Bva06g00291 1717 Gene3D - 387 465 IPR015943 GO:0005515
Bva06g00291 1717 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 389 421 - -
Bva06g00291 1717 CDD Bromo_WDR9_I_like 1589 1715 - -
Bva06g00291 1717 MobiDBLite consensus disorder prediction 778 972 - -
Bva06g00291 1717 SUPERFAMILY Bromodomain 1648 1715 IPR036427 GO:0005515
Bva06g00291 1717 MobiDBLite consensus disorder prediction 868 886 - -
Bva06g00291 1717 ProSiteProfiles Trp-Asp (WD) repeats profile. 282 323 IPR001680 GO:0005515
Bva06g00291 1717 MobiDBLite consensus disorder prediction 838 867 - -
Bva06g00291 1717 Gene3D - 479 670 IPR015943 GO:0005515
Bva06g00291 1717 MobiDBLite consensus disorder prediction 515 534 - -
Bva06g00291 1717 ProSiteProfiles Trp-Asp (WD) repeats profile. 389 421 IPR001680 GO:0005515
Bva06g00291 1717 ProSiteProfiles Trp-Asp (WD) repeats profile. 579 613 IPR001680 GO:0005515
Bva06g00291 1717 ProSiteProfiles Trp-Asp (WD) repeats profile. 324 368 IPR001680 GO:0005515
Bva06g00291 1717 MobiDBLite consensus disorder prediction 518 532 - -
Bva06g00291 1717 CDD WD40 236 612 - -
Bva06g00291 1717 Pfam WD domain, G-beta repeat 235 272 IPR001680 GO:0005515
Bva06g00291 1717 Pfam WD domain, G-beta repeat 320 359 IPR001680 GO:0005515
Bva06g00291 1717 Pfam WD domain, G-beta repeat 390 421 IPR001680 GO:0005515
Bva06g00291 1717 Pfam WD domain, G-beta repeat 573 612 IPR001680 GO:0005515
Bva06g00291 1717 Pfam WD domain, G-beta repeat 278 313 IPR001680 GO:0005515
Bva06g00291 1717 MobiDBLite consensus disorder prediction 367 389 - -
Bva06g00291 1717 SMART WD40_4 317 359 IPR001680 GO:0005515
Bva06g00291 1717 SMART WD40_4 433 498 IPR001680 GO:0005515
Bva06g00291 1717 SMART WD40_4 572 612 IPR001680 GO:0005515
Bva06g00291 1717 SMART WD40_4 382 421 IPR001680 GO:0005515
Bva06g00291 1717 SMART WD40_4 531 569 IPR001680 GO:0005515
Bva06g00291 1717 SMART WD40_4 275 314 IPR001680 GO:0005515
Bva06g00291 1717 SMART WD40_4 233 272 IPR001680 GO:0005515
Bva06g00291 1717 ProSiteProfiles Trp-Asp (WD) repeats profile. 240 281 IPR001680 GO:0005515
Bva06g00291 1717 MobiDBLite consensus disorder prediction 368 389 - -
Bva06g00291 1717 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 240 275 - -
Bva06g00291 1717 PANTHER WD REPEAT DOMAIN 9 23 1716 - -
Bva06g00291 1717 MobiDBLite consensus disorder prediction 1157 1171 - -
Bva06g00291 1717 ProSitePatterns Trp-Asp (WD) repeats signature. 599 613 IPR019775 -
Bva06g00291 1717 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 324 359 - -
Bva06g00291 1717 MobiDBLite consensus disorder prediction 1157 1216 - -
Bva06g00291 1717 MobiDBLite consensus disorder prediction 1280 1314 - -
Bva06g00291 1717 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 282 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00291 Bva-Chr6 4408865 4422298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00291 232 421 Miscellaneous Gene Families AT5G08390 21.466 6.51e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00291 K11797 - gmx:100818665 2447.93