Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00280 atgaatcccAAATGGGTTCTGCTGTTGGGAATTGCAGCAATGTTGGTTGTTGTGAATGGAGAGTCCGCAGTGAAGCCATTGGTGAAGACAGTGAAGGGCAAGAAGTTATGTGATAAAGGTTGGGAATGCAAGGGTTGGTCTGCTTATTGCTGCAATGAGACTATTTCTGATTATTTTCAGGTTTACCAGTTTGAAAACCTCTTCGAAAAGCGTAATTCCCCAGTTGCCCATGCCGTGGGTTTCTGGGATTACCGTTCCTTTGTCACTGCTGCGGCATTATACCAGCCACTTGGGTTTGGTACTACTGGAGGAAAGCTCAATGGGTTGAAGGAGGTGGCAGCTTTTCTTGGTCATGTGGGCAGCAAAACCTCTTGTGGATATGGGGTGGCCACTGGAGGACCCTTTGCCTGGGGATTGTGCTACAATAAAGAGCTGAGCCCTGATAAGTACTATTGTGATGACTACTGCAAATTGACCTATCCATGTGCTCCTGGGGCAGCATACTATGGCCGTGGTGCCATTCCAATCTATTGGAACTACAACTATGGGAAAACTGGGAAAGCCTTGAAGGTGGATTTGTTGAACCATCCAGAATACATAGAACAGAACGCAACCTTGGCCTTCCAAGCTGCAATATGGAGGTGGATGACCCCAGCCGAGAAGCATCAACCTTCAGCACACGACGCCTTTGTTGGCAACTGGAAACCCACCAAGAACGACACACTGGCTAAGCGAGTCCCTGGATTTGGAACCACCATGAATGTTCTCTATGGGGATATTGTGTGTGGCCAGGGACCCGACAATGAGTCTATGAACAATATCATCTCCCACTATCTGTATTACCTTGATCTCATGGGTGTTGGCAGAGAAGAGGCAGGGCCTGATGAAGGGCTTTCTTGCGGTGCGCAAGAGCCTTTTAAAGCTTCTGGTTCATTGTCTTTTTCAACTTG 950 0.4737 MNPKWVLLLGIAAMLVVVNGESAVKPLVKTVKGKKLCDKGWECKGWSAYCCNETISDYFQVYQFENLFEKRNSPVAHAVGFWDYRSFVTAAALYQPLGFGTTGGKLNGLKEVAAFLGHVGSKTSCGYGVATGGPFAWGLCYNKELSPDKYYCDDYCKLTYPCAPGAAYYGRGAIPIYWNYNYGKTGKALKVDLLNHPEYIEQNATLAFQAAIWRWMTPAEKHQPSAHDAFVGNWKPTKNDTLAKRVPGFGTTMNVLYGDIVCGQGPDNESMNNIISHYLYYLDLMGVGREEAGPDEGLSCGAQEPFKASGSLSFST 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00280 316 Gene3D - 63 306 - -
Bva06g00280 316 PANTHER - 11 309 - -
Bva06g00280 316 PIRSF Endochitinase 2 307 IPR016283 GO:0004568|GO:0005975
Bva06g00280 316 Gene3D Endochitinase, domain 2 143 202 - -
Bva06g00280 316 Pfam Chitinase class I 63 290 IPR000726 GO:0004568|GO:0006032|GO:0016998
Bva06g00280 316 MobiDBLite consensus disorder prediction 293 316 - -
Bva06g00280 316 PANTHER CHITINASE-RELATED 11 309 - -
Bva06g00280 316 SUPERFAMILY Lysozyme-like 55 306 IPR023346 -
Bva06g00280 316 CDD chitinase_GH19 63 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00280 Bva-Chr6 4341678 4343259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00280 22 306 Glycoside Hydrolase AT3G16920 81.404 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00280 - - gmx:100809617 584.719