Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00278 ATGGCTTATTTCAATAATAGCAATAGAAGAAACCACGATTCTCATTCTctggctttcttcttcttcttactAGTTCTTGTACTGTGCTTTCGGGTTGGCGAAGGGAGGGCGCCGTTTGCATGCGACCCCAAGAATGGGTTCACGAGGACCCTCAAGTTCTGCAGGACGAACGTGCCGATCCACGCGAGGGTGCAGGACCTCATCGGACGGCTCACATTGCAGGAGAAGATACGGTTGATCGTAAACAATGCCATTGCGGTTCCCAGGTTGGGTATTCAGGGATATGAGTGGTGGTCGGAGGCGCTTCATGGTGTCTCTAATGTGGGCCCGGGAACCAAGTTCGGTGGGGCCTTCCCCGGGGCCACTGCTTTCCCTCAGGTCATCACCACTGCCGCTTCCTTCAATGAATCTCTCTGGCAGGAAGTCGGACGGGTGGTGTCTGACGAAGCAAGGGCAATGTACAATGGAGGAATGGCTGGATTGACATTTTGGAGCCCTAACGTGAACATATTCCGGGACCCGCGTTGGGGCCGAGGCCAGGAGACTCCCGGCGAAGACCCGGTTTTGGCCGGAAAATATGCCGCCAGATATGTCCAGGGGCTCCAGGGTGATGGGGCAGGGAACCGGCTCAAGGTCGCTGCTTGTTGCAAACACTACACTGCTTATGATCTTGACAATTGGAATGGCATAGACAGATTTCATTTCAACGCTAAGGTTAGCAAACAAGACTTGGCAGACACGTATGATGTCCCATTCAAAGCCTGTGTGGTGGAAGGGAAGGTGGCTAGTGTCATGTGCTCCTACAATCAGGTCAACGGCAAACCCACCTGCGCCGATCCCGATCTCCTCCGCAACACTATCCGTGGTCAATGGGGCCTCAACGGGTACATAGTTTCGGACTGTGATTCAGTCGGGGTTATGTACGACGACCAACACTACACAAGGACACCTGAGGAAGCAGCGGCAGATACAATTAAAGCGGGCCTGGATTTGGATTGTGGGCCCTTCTTGGCAATCCACACAGAATCGGCTATAAGAAATGGGCTTCTAACTGAGAATGACGTCAACCTTGCTTTGGCAAATCTTATAACAGTCCAAATGAGATTGGGCATGTACAATGGGGAACCATCAGCCCAACCGTACGGGAACTTGGGCCCAAAAGATGTTTGCACTCCGGCCCATCAACAACTCGCCCTTGAGGCAGCTAGACAGGGTATTGTTCTACTCcaaaataaaggaaatgcGCTGCCGTTATCCCCTGCGCGCCACCGCACCGTAGCGGTGATCGGGCCCAATTCTGATGTTACTGTTACAATGATAGGAAACTATGCTGgCGTGGCTTGTGGTTATACGACGCCGTTGCAAGGGATTGCTAGGTATGTTAAGACCATTCGTCAAGTAGGATGCGGAGATGTTGGTTGTCGTAGCAATCAGCTATTCGGGGCGGCTGAGGTTGCTGCAAGACAGGCCGATGCTACTGTCTTGGTAGTGGGCCTTGATCAATCCATAGAGGCAGAATTCAGGGACAGGGTTGGGCTTCTTTTACCTGGATTACAGCAAGAGCTTGTGTCAAGGGTAGCCAGGGCTGCAAGAGGCCCAGTTGTTTTGGTCATCATGTCTGGGGGGCCTGTTGATGTCTCTTTTGCCAAAAATGACCCTAAGATTAGTGCCATTTTGTGGGCTGGCTATCCAGGACAAGCTGGTGGAACTGCTATAGCTGATGTTCTTTTCGGCACAATTAACCCAGGAGGAAAGCTTCCCATGACATGGTACCCACAAGAGTATCTGGCTAAAGTACCCATGACAAACATGGATTTGAGAGCAAACCCAGCAAGAGGGTACCCAGGAAGAACCTACAGATTCTACAAGGGTCCAGTAGTGTTTCCCTTTGGATATGGCCTAAGCTACAGTAGATTCACCCACAGCTTAGCCGAAGCCCCCAAGCAGGTCTCTGTTTCCTTAGCTTCCCTTCAAGCCATGACCAACACCTCAACCATAACAAGCAATGCAGTGAAGATGAGTCACATAAATTGCAACGCGCTGCAACTAGGACTGCATGTAGATGTGAAGAACGAAGGCACCATGGATGGCACTCATACCCTTCTCGTCTTCTCAACTCCGCCGGCCGGAAAATGGTCGGCGACCAAGCAACTAGTGAGCTTCCACAAGATTCATTTACCTGCCGGCTCAAAGCAGCGGGTCAAAGTTGATGTTCATGTGTGCAAGCACCTTAGCGTGGTGGACAAGTTTGGAATTCGAAGAATTCCAATGGGTGAACATGAAATCCACATTGGTGATAATCTCAAgcattcattttctctccaagttccggaacaaatcaaatttta 2348 0.4949 MAYFNNSNRRNHDSHSLAFFFFLLVLVLCFRVGEGRAPFACDPKNGFTRTLKFCRTNVPIHARVQDLIGRLTLQEKIRLIVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATAFPQVITTAASFNESLWQEVGRVVSDEARAMYNGGMAGLTFWSPNVNIFRDPRWGRGQETPGEDPVLAGKYAARYVQGLQGDGAGNRLKVAACCKHYTAYDLDNWNGIDRFHFNAKVSKQDLADTYDVPFKACVVEGKVASVMCSYNQVNGKPTCADPDLLRNTIRGQWGLNGYIVSDCDSVGVMYDDQHYTRTPEEAAADTIKAGLDLDCGPFLAIHTESAIRNGLLTENDVNLALANLITVQMRLGMYNGEPSAQPYGNLGPKDVCTPAHQQLALEAARQGIVLLQNKGNALPLSPARHRTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGIARYVKTIRQVGCGDVGCRSNQLFGAAEVAARQADATVLVVGLDQSIEAEFRDRVGLLLPGLQQELVSRVARAARGPVVLVIMSGGPVDVSFAKNDPKISAILWAGYPGQAGGTAIADVLFGTINPGGKLPMTWYPQEYLAKVPMTNMDLRANPARGYPGRTYRFYKGPVVFPFGYGLSYSRFTHSLAEAPKQVSVSLASLQAMTNTSTITSNAVKMSHINCNALQLGLHVDVKNEGTMDGTHTLLVFSTPPAGKWSATKQLVSFHKIHLPAGSKQRVKVDVHVCKHLSVVDKFGIRRIPMGEHEIHIGDNLKHSFSLQVPEQIKF 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00278 782 Gene3D - 63 380 IPR036962 GO:0004553|GO:0005975
Bva06g00278 782 Pfam Glycosyl hydrolase family 3 N terminal domain 118 363 IPR001764 GO:0004553|GO:0005975
Bva06g00278 782 Pfam Fibronectin type III-like domain 702 766 IPR026891 -
Bva06g00278 782 SUPERFAMILY (Trans)glycosidases 51 405 IPR017853 -
Bva06g00278 782 Gene3D Immunoglobulins 661 777 IPR013783 -
Bva06g00278 782 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 406 639 IPR036881 GO:0004553|GO:0005975
Bva06g00278 782 PANTHER BETA-D-XYLOSIDASE 1 17 776 - -
Bva06g00278 782 PRINTS Glycosyl hydrolase family 3 signature 212 228 IPR001764 GO:0004553|GO:0005975
Bva06g00278 782 PRINTS Glycosyl hydrolase family 3 signature 124 143 IPR001764 GO:0004553|GO:0005975
Bva06g00278 782 PRINTS Glycosyl hydrolase family 3 signature 286 304 IPR001764 GO:0004553|GO:0005975
Bva06g00278 782 PANTHER SUGAR HYDROLASE-RELATED 17 776 IPR044993 GO:0009044|GO:0045493
Bva06g00278 782 Gene3D - 392 637 IPR036881 GO:0004553|GO:0005975
Bva06g00278 782 SMART Fn3_like_2 699 768 IPR026891 -
Bva06g00278 782 Pfam Glycosyl hydrolase family 3 C-terminal domain 406 636 IPR002772 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00278 Bva-Chr6 4325050 4329736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00278 23 775 Glycoside Hydrolase AT5G49360 72.895 0.0 1152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00278 - - gmx:100812823 1315.44