Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01573 ATGAGTACTGCGCCGCATGCAATTGAAGCTAGACACCGGCCATTTGCACCCATGTGGATATGGGGCGGTCCCAATCCCCGGTACATATCTAATATGGACATTGATTGGGAAGATATAGTGAAAGGAATTGGGCTATTGAACTTCAACAAGAGCGAAATAGAGAAGTGGGAGAAGGTTATTTCTGAAGCAAAACATGTGGTTTTGCAGCTTGAGTATGCTGCAAGAAATGTGACATGGAttgatgaggaagaagaaactgaAGTCCCCGTTTGCCCATCTCTACCAAGACTGGGATCTCCTGGAATAAGGCTTAATCTCATTGCTGTGAAGCTTCCTTGCAGGAAAGAGAATGGTGGGAATTGGTCCAGAGATGTTGGTCGCTTGCACCTGCAGCTTGCAGCAGCTGCCCTTGCAGCCTCTTTCAAAGGCAATTATCCTGTATATGTGCTCTTCATTACCAATTGCTTACCAATACAAAATCTTTTTACTTGCAAAGAACTTGTTGCACATGAAGGGAATGTTTGGTTGTACAGACCAAACTTGAGTGTCCAAAGGGAAAAGGTTCAACTCCCCCAGGATCTTGTGAACTTGCTCTTCCTACGAGGGACAAAGTGGGTACCACCAAAGTGGAGTGGAAGCAGCAGGCTGGAAAATCGGGACAATCCAGAGGATCAGAAACCCAAAAGCAGACAAAGATGCATATATGAATGGAACTATAGCAAGTTCAGATTATGGCAGCTCACAGATTATGATAAGATCCCTTTCATTGATGCTGATTTACTTATACTAAGAAACATCGATTTCCTCCTTGGAATGCCTGAGATTACGGCTACCGGAAACAATGCCACACTTTTTAACTCTGGTGTCATGGTTCTTGAGCCATCAAATTGCACATTCCAGCTTCTGATGGATCATATTAATGAGATTGAGTCCTACAATGGAGGGGACCAGGgatatttgaatgaaatattcACATGGTGGCACAGGATTCCCAGGCATATGAACTTTCTGAAGCATTTTTGGATTGGTgacgaagaagagaagaagcaaATGAAGACTAGGTTATTTGGGGCTGAGCCTCCAATTCTTTTATGTTCTTCACTATCTGGTGATGTTGCTCATGCAAGGTGGTGGAAGGTTCATGATGCAATGCCTGAGAAATGTGTTGATAATTTGTATTCCTGGGAAGGCATGTTGCAGCACTGGGGAGAGACAAATTGGACGGACGATGAGTCTTACTATCCAACACCACCGGCCATTATCACAGCTTCTCTTTCTGCTTTGTG 1286 0.4222 MSTAPHAIEARHRPFAPMWIWGGPNPRYISNMDIDWEDIVKGIGLLNFNKSEIEKWEKVISEAKHVVLQLEYAARNVTWIDEEEETEVPVCPSLPRLGSPGIRLNLIAVKLPCRKENGGNWSRDVGRLHLQLAAAALAASFKGNYPVYVLFITNCLPIQNLFTCKELVAHEGNVWLYRPNLSVQREKVQLPQDLVNLLFLRGTKWVPPKWSGSSRLENRDNPEDQKPKSRQRCIYEWNYSKFRLWQLTDYDKIPFIDADLLILRNIDFLLGMPEITATGNNATLFNSGVMVLEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTRLFGAEPPILLCSSLSGDVAHARWWKVHDAMPEKCVDNLYSWEGMLQHWGETNWTDDESYYPTPPAIITASLSAL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01573 428 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 226 363 - -
Bva05g01573 428 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 368 388 - -
Bva05g01573 428 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 13 199 - -
Bva05g01573 428 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 142 387 IPR029044 -
Bva05g01573 428 PANTHER GLYCOGENIN SUBFAMILY MEMBER 368 388 - -
Bva05g01573 428 SUPERFAMILY Nucleotide-diphospho-sugar transferases 220 384 IPR029044 -
Bva05g01573 428 PANTHER GLYCOGENIN SUBFAMILY MEMBER 226 363 - -
Bva05g01573 428 PANTHER GLYCOGENIN SUBFAMILY MEMBER 13 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01573 Bva-Chr5 12895754 12898245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01573 25 428 Glycosyltransferase AT3G18660 48.257 1.58e-158 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01573 K20890 - gmx:100780439 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01573 05 12895754 12898245 Bva05g01573 05 12895754 12898245 ECH