Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01565 ATGGTAAACAGAGGTTCACACAACACTGGCAACCTTCAGACTGCTAGATTTCGTACCAGGAAACTTTCTCCTAGCGCAATCACACTATAcaccttttttatatttgctttCTCTATATTTGTCTTCCTGTTTTACGTTAGGAATATCGTGGAGGATGAGCAACCTCAGCATCCTTTGCTTTCTGTAGAATCTCGATCTGAGCAGGTGCCAAAGTTACATGTGCATGATGACCGACTTTGGGGTTCTCCTCTCAATCCTGGTTTACACCCTTGTGTCAAGCCAACTACTAAATATAAAGGTTCTCAAAATTCTGATCACTATCTAACTGTGAGAAGTAATGGTGGTCTAAATCAAATGAGAACTGGTATATCTGACATGGTGGCTGTGGCACACATAATGAATGCAACTTTAGTCATCCCACAACTGGATAAACGTTCCTTCTGGCAAGATTCTAGTGTATTTTCAGATATATTTGATGAGCTCCATTTCATTGAATCCTTGAAAGGGGATGTCAGGATTGTCAGGGAACTTCCCAAGCACTTGGAAGGTGCCCCCCGAGCTAGGAAACACTTCACTTCCTGGTCTGGTGTGGGTTACTTTGAAGAGATGACAAAGTTATGGAATGACTATCAGGTGGTGCATGTTGCAAAATCAGATTCTCGACTTGCAAACAATAATCTTCCTCTTGACATCCAAAAGTTAAGATGTCGTGCAATGTATCATGCACTTCGATTTTCTCCCCCAATTGAGAGTTTGGGAAAGAAGTTGGTGGAGCGGCTGAGACCACTTGGGGGAAGATATATTGCTCTCCATTTGAGATATGAGAAAGATATGTTGTCCTTTACTGGTTGTACCTATGGTCTGACAGATGCAGAATCTGAAGAGCTGAGAATTATGAGGGAGAACACAAACCATTGGaaggtaaaatatataaactcaaCAGAACAGAGAATTGGAGGATTTTGTCCACTGACTCCCAAGGAGGTGGGAATTTTTCTTCAAGCTCTTGGTTTTCCTCCATCAACACTAATTTACATTGCAGCTGGGGATATTTATGGTGGTAATACTCATCTTTTGGAGCTCTCCTCCCGCTTCCCAAATCTAGTCTTCAAGGAATCACTTGTGACCCCTGAAGAACTGCAAGCACTCACCAATCATGCATCCCAATGGGCGGCACTTGATTACATAATCTCTGTAGAAAGTGATGTATTTATTCCATCATATTCAGGAAATATGGCAAGAGCTGTTGAGGGACATCGCAGATTCTTAGGTCACCGCAGAACAATCAGTCCAGACCGGAAAGGACTTGTGGAAATATTTGATAAGCTGGAAACTGGAGAGCTAGACGAGGGACCCTCATTGTCACATCTGGTGCAGCGGATGCACAAAAACAGgcAAGGGGCTCCAAGGAAAAGACAAGGTTCCTTACCAGGAATTAAAGGACGAGCACGTTTCAGGACTGAAGAGGCCTTCTATGAAAATCCATACCCTGAGTGTATATGTAGTTCTAGAAGGTA 1517 0.4192 MVNRGSHNTGNLQTARFRTRKLSPSAITLYTFFIFAFSIFVFLFYVRNIVEDEQPQHPLLSVESRSEQVPKLHVHDDRLWGSPLNPGLHPCVKPTTKYKGSQNSDHYLTVRSNGGLNQMRTGISDMVAVAHIMNATLVIPQLDKRSFWQDSSVFSDIFDELHFIESLKGDVRIVRELPKHLEGAPRARKHFTSWSGVGYFEEMTKLWNDYQVVHVAKSDSRLANNNLPLDIQKLRCRAMYHALRFSPPIESLGKKLVERLRPLGGRYIALHLRYEKDMLSFTGCTYGLTDAESEELRIMRENTNHWKVKYINSTEQRIGGFCPLTPKEVGIFLQALGFPPSTLIYIAAGDIYGGNTHLLELSSRFPNLVFKESLVTPEELQALTNHASQWAALDYIISVESDVFIPSYSGNMARAVEGHRRFLGHRRTISPDRKGLVEIFDKLETGELDEGPSLSHLVQRMHKNRQGAPRKRQGSLPGIKGRARFRTEEAFYENPYPECICSSRR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01565 505 CDD O-FucT_plant 107 428 IPR024709 -
Bva05g01565 505 PANTHER O-FUCOSYLTRANSFERASE 38 11 504 - -
Bva05g01565 505 PANTHER OS02G0726500 PROTEIN-RELATED 11 504 - -
Bva05g01565 505 PIRSF UCP009360 1 505 IPR024709 -
Bva05g01565 505 Pfam GDP-fucose protein O-fucosyltransferase 107 422 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01565 Bva-Chr5 12847186 12853118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01565 77 501 Miscellaneous Gene Families AT1G22460 58.216 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01565 - - gmx:100810961 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01844 06 12683248 12688057 Bva05g01565 05 12847186 12853118 ECH
Bva10g00997 10 7328304 7335075 Bva05g01565 05 12847186 12853118 ECH
Bva05g01565 05 12847186 12853118 Bva05g01565 05 12847186 12853118 ECH