Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01558 ATGGATCTTTTGCTGGTTCCTTACTCATCAGATCCTAGCTTGAAAATAATTCAGTGGCCACCCTTTCTGCTTGCTAGCAAGATTCCAGTAGCATTGGATATGGCAGTTCAGTTTAGAGCCAGGGACGCTGACCTTTGGAAGCGTATATGTGCTGATGAGTATATGAAATGTGCTGTTATTGAGTGCTAtgaatcttataaaaatattcttaatactTTGGTGGTTGGAGAAACTGAGAAAAGGATAATTGCCAATATCATTAAAGAAGTCGAAAGTAGCATATCAAAGAACACGCTTCTTACAAATTTCAGAATGGCCTTTCTACCCTCCCTTTGTAAGAAGTTTGTGGAACTTGTGGAAATCTTGAAAGATGCAGATCCGTCCAAACGAGGTGCAGCGGTACTATTGCTACAAGACATGCTAGAAGTGGTCACTCGTGATATGATGGTGAAAGAAATCAGTGAGCTGGTAGAACTTGGTCATAGTAGCAAGGATACTGGAAGGCAACTTTTTGCTGGTACTGATGCAAAACCTGCTATAGTATTCCCTCCTGTGGTTACTGCACAGTGGGAGGAACAGATAAGACGTCTTTATCTACTCTTGACGGTAAAGGAATCTGCAATTGAGGTGCCAACAAACCTTGAAGCACGCAGAAGAATTTCCTTCTTTACTAATTCTTTGTTCATGGAGATGCCACGTGCTCCACGAGTGCGAAAAATGCTCTCATTCAGCGTCCTAACTCCATACTATAGTGAAGAGACTGTCTATTCAAAGAGTGACCTTGAGGTGGAAAACGAAGACGGTGTGTCTATCATTTATTACCTGCAAAAGATCTTCCCAGATGAGTGGAATAACTTCATGGAGCGACTTAATTGTAAGAAAGATAGTGAGATATGGGAGAAAGACGAGCATATTTTGCAGCTTCGTCACTGGGCTTCCTTAAGAGGCCAAACTCTTTGCAGGACAGTTAGGGGGATGATGTACTACCGACGGGCTCTGAAGCTACAGGCTTTTCTTGATATGGCTAATGAAAAAGAGATACTCGAAGGTTATAAAGCTATAACCTCTCCATCAGAGGAAGATAAAAAGAGCCAAAGATCCCTATATGCCAGTTTAGAGGCTGTGGCTGACATGAAATTTACGTACGTTGCTACCTGTCAGATCTATGGCAATCAGAAGCGCAGCGGAGACCGCCGTGCAACAGATATCCTGAATTTGATGGTTAACAATCCTTCCCTTCGTGTGGCATATATAGATGAagttgaagaaagagaaggtgGAAGAGTACAGAAGGTTTATTATTCTGTATTGATCAAGGCTGTGGACAATCTAGACCAAGAAATCTATCGCATAAAACTGCCCGGTCCGGCAAAATTAGGAGAAGGGAAGCCCGAAAATCAGAATCATGCCATCATTTTTACTAGAGGGGACGCTCTTCAGACTATTGACATGAACCAAGATAATTACTTGGAAGAAGCCTTAAAAATGCGTAACCTTCTGGAAGAATTTAATGAGGATCATGGGGTGCGCCGGCCTACCATATTGGGTGTTCGTGAGCATATCTTTACTGGCAGtgtctcttccttggcttGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAGAGAGTTCTCGCAAGACCCCTGAAGGTTCGATTCCACTATGGTCATCCAGATGTTTTTGATAGAATTTTCCACATTACCCGTGGAGGAATGAGCAAAGCATCTCGGGGCATCAATCTTAGCGAGGATATCTTTGCTGGATTCAACTCTACGCTAAGACGTGGGAATATTACTCATCATGAATATATCCAAGTTGGAAAGGGTAGAGATGTTGGGCTcaaccaaatatctctttttgaAGCAAAAGTGGCCTGTGGTAATGGAGAGCAGACACTGAGTAGGGATATCTACCGGTTGGGTCATCGTTTTGACTTTTTCCGCAtgatgtcattttattttacaaccATCGGATTTTATTTCAGCTCAATGTTAGTGGTGTTGACGGTTTATGCTTTCCTATATGGCAAACTTTATCTGGCGTTGAGTGGACTTGAGAAGGCAATAGTTAAGTTTGCCAGGAGAAAGGGAGACGTTCCTCTAAAGGCGGCGATGGCTTCACAGTCCCTTGTTCAAATAGGTCTTCTGATGACTCTGCCCATGGTCATCGAAATTGGACTGGAGAGAGGGTTCAGAACTGCTTTAGGTGACCTCATTATAATGGAATTACAGCTAGCACCcgttttcttcactttctcgCTAGGATCAAAGTTGCACTATTATGGGCGCACCCTCCTGCATGGTGGGGCGAAGTACAGAGCAACAGGGCGTGGTTTTGTGGTCAGGCATGAGAAGTTCGCGGAGAACTATCGGATGTACTCTATGAGTCACTTTGTAAAAGGGATGGAGCTTGCAATATTGCTTATAGTTTATAGAATTTATGGAACAGCAACTCCGGATTCGGTAACATACGCCCTTGTCACCGGGTCCGTGTGGTTTTTGGTGTGTTCTTTCCTGTTTGCACCTTTCCTTTTCAATCCTTCAGGATTTGAGTGGCAGAAGATAGTTGAGGATTGGGATGATTGGGCAAAATGGATAAGTAGTCATGGTGGTATTGGTGTTCCTGCAAACAAGAGCTGGGAATCATGGTGGGATGAGGAACAGGAGCATCTCAAGTACACTGGGATCATAGGGCGGTTTTGGGAGGTTGTTCTTGCTCTGCGCTTCTTTGTGTATCAGTACGGCATTGTGTATCATCTACATGTAACCAGAGGTGACCAAAACATCATGGTTTATGGTCTGTCCTGGCTGGTCATAGTAGCTGTTATGGTCATCTTGAAGATTGTGTCTATGGGTAGAAAGAAGTTCACTGCAGACTTTCAGCTGATGTTCCGtcttctcaaatttttccTGTTTATTGGGGCCGTTGTCATTCTGGGCTTAATGTTTACGCTTCTAAGTCTCACTCTTGGAGATATCTTAGCAAGCCTTCTGGCCTTTATGCCAACAGGATGGGCACTGGTACAGATAGCACAAGCATGCAGACCATGGGTGAAGGGCATTGGAATGTGGGGATCTGTCAGAGCTTTGGCAAGAGGATATGACTATTTGATGGGAGTGGTCATCTTTGCACCAGTGGCTATATTGGCATGGTTCCCATTTGTTTCAGAATTCCAAACTAGGCTGCTATTCAACCAAGCATTCAGCCGAGGGCTTCAGATCCAGCGTATTTTGGCCGGTGCTGGTGGCAAGAAGCATAAGTA 3272 0.4227 MDLLLVPYSSDPSLKIIQWPPFLLASKIPVALDMAVQFRARDADLWKRICADEYMKCAVIECYESYKNILNTLVVGETEKRIIANIIKEVESSISKNTLLTNFRMAFLPSLCKKFVELVEILKDADPSKRGAAVLLLQDMLEVVTRDMMVKEISELVELGHSSKDTGRQLFAGTDAKPAIVFPPVVTAQWEEQIRRLYLLLTVKESAIEVPTNLEARRRISFFTNSLFMEMPRAPRVRKMLSFSVLTPYYSEETVYSKSDLEVENEDGVSIIYYLQKIFPDEWNNFMERLNCKKDSEIWEKDEHILQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMANEKEILEGYKAITSPSEEDKKSQRSLYASLEAVADMKFTYVATCQIYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGRVQKVYYSVLIKAVDNLDQEIYRIKLPGPAKLGEGKPENQNHAIIFTRGDALQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGMSKASRGINLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMMSFYFTTIGFYFSSMLVVLTVYAFLYGKLYLALSGLEKAIVKFARRKGDVPLKAAMASQSLVQIGLLMTLPMVIEIGLERGFRTALGDLIIMELQLAPVFFTFSLGSKLHYYGRTLLHGGAKYRATGRGFVVRHEKFAENYRMYSMSHFVKGMELAILLIVYRIYGTATPDSVTYALVTGSVWFLVCSFLFAPFLFNPSGFEWQKIVEDWDDWAKWISSHGGIGVPANKSWESWWDEEQEHLKYTGIIGRFWEVVLALRFFVYQYGIVYHLHVTRGDQNIMVYGLSWLVIVAVMVILKIVSMGRKKFTADFQLMFRLLKFFLFIGAVVILGLMFTLLSLTLGDILASLLAFMPTGWALVQIAQACRPWVKGIGMWGSVRALARGYDYLMGVVIFAPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGAGGKKHK 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01558 1090 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 93 106 IPR004838 GO:0003824|GO:0009058|GO:0030170
Bva05g01558 1090 Pfam 1,3-beta-glucan synthase component 301 902 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Bva05g01558 1090 Pfam 1,3-beta-glucan synthase component 210 297 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Bva05g01558 1090 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1089 - -
Bva05g01558 1090 PANTHER CALLOSE SYNTHASE 5 1 1089 - -
Bva05g01558 1090 Coils Coil 486 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01558 Bva-Chr5 12811329 12818033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01558 1 1083 Glycosyltransferase AT1G05570 62.929 0.0 1442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01558 K11000 - gmx:100777245 1944.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01558 05 12811329 12818033 Bva05g01558 05 12811329 12818033 ECH