Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01554 ATGGCTTTCTCTGTAACTCTAAGCTTGTGCCAGTACAACTCTTTCTCACGCCTGCATCAGTATAACTTGCCAAAAACTTTaacaagaaatagaaaacTTGTTCATTTCCCATGGATTCGCGCAGTACAATCCACCGAGCCAGACAAGCAAAACGGCGCACAGTCCTCCGATTCCAATGCTCAACCTTCAACTTCAAGCACTGCTCCTAAAACTCCCAAGAAACCAGTCTATTCCATGAAGAAAGGCCAGATAGTCAGAGTGGATAAAGAAAAGTATCTCAACAGTATTAATTATCTCTCCGTTGGACATCCACCTTATTACAAAGGATTAGACTACATTTACGAAGACCGTGGTGAGGTCCTAGATTTGCGGATATTTGAAACAGGAGAATATGCACTTATTGCATGGGTTGGGATCCCAACTGCTCCGGCCTGGCTTCCCACGGACATGCTCATCAAGTCGGAGAAGCTTAATTATGAGAGGCTATG 488 0.4303 MAFSVTLSLCQYNSFSRLHQYNLPKTLTRNRKLVHFPWIRAVQSTEPDKQNGAQSSDSNAQPSTSSTAPKTPKKPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDLRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01554 162 Pfam Cyanobacterial and plant NDH-1 subunit O 79 153 IPR020905 GO:0005886|GO:0016655
Bva05g01554 162 MobiDBLite consensus disorder prediction 46 78 - -
Bva05g01554 162 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC 1 162 - -
Bva05g01554 162 MobiDBLite consensus disorder prediction 46 72 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01554 - - pop:7466735 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01554 05 12787392 12789208 Bva05g01554 05 12787392 12789208 ECH