Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01550 ATGGAAGCATCAGATTCAGAAGCGCAAATCGGCAGCAACAATCGAATCGGAAGTGGAAACCCTAATCATAATAATACTTCACTGCCGCGTTCAGTTCCTATTTGGCCCACAATCGATGGGGCTCTTGGGCTATCGGAAGAAGATTCAGTGAGCTATGCACGAAGATTCTACAAATTTGGATTCGCTTTACTTCCTTTGCTTTGGGCTGTCAATTGCTTCTACTTCTGGCCTGTCCTCCGCCACGCCCACTCCTTCCCTCGCATTCGCCGTTATGTTGTTGGATCAGCGGTTGGGTTTACTGTATTCACAACAATTCTCTGTTCATGGGCACTAACGTTTGCCATTGGAGGGGAACGCCTATTCGGGCCTGTTTGGGATCAATTGGTTATGTACAATCTTGCTGATAGGTTGGGACTCACAGGCTGGAGCTA 431 0.478 MEASDSEAQIGSNNRIGSGNPNHNNTSLPRSVPIWPTIDGALGLSEEDSVSYARRFYKFGFALLPLLWAVNCFYFWPVLRHAHSFPRIRRYVVGSAVGFTVFTTILCSWALTFAIGGERLFGPVWDQLVMYNLADRLGLTGWS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01550 143 MobiDBLite consensus disorder prediction 1 28 - -
Bva05g01550 143 Pfam Presenilin enhancer-2 subunit of gamma secretase 46 133 IPR019379 -
Bva05g01550 143 PANTHER GAMMA-SECRETASE SUBUNIT PEN-2 14 143 IPR019379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01550 Bva-Chr5 12775888 12777461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01550 K06170 - gmx:106798930 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01550 05 12775888 12777461 Bva05g01550 05 12775888 12777461 ECH