Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01545 ATGGCTGAAAGGGTTTTTGGGGTTGGGATTGTCGGCAGCTCTCAGCAATTCGGTGTTGCTGTCATGAGGAAATCAACGGCCATTCTCAGCAATCTCAAGTCCAAATTGCCCTTAATGGGTTTGGGTCGTTGGGGAAACTCCGCTCATTTTCACACAAACACTCCCACCCAATTTAATCGAAACCGAATCCCCCATCTtgatcataatcataatcaaatACTGACATCTTCTTCCTTCGTTGCCCGCCGATTTGAGTCCAACATTGCACAAGATCATTTGAACTCCACTTGCGGTTCCCATGAGAATCTGAATCAGGCCCTGGATTTTCCGGGAGGGACAGTTATGTTCACTCCTGAATTGAGCTTTATATCTGATTCACCTGAGGAGAGAATACCATGCTATCGTGTCCTTGATGACAATGGGCAACCAATTTCCGGCAATAACTTTGGGCAGGTCAATGAAGAAGTTGCTCTAAAGATTTATCAGGATATGGTTACACTGCAAACTATGGATACTCTCTTCTATGAAGCTCAAAGGCAAGGtagaatttccttttatgCAACAACCATTGGAGAAGAGGCTATCAACATTGCATCAGCGGCAGCACTTACTCTGAATGACATTGTCTTCCCTCAGTACAGGGAACCTGGAGTCCTGTTATGGCGTGGTTTCACGCTTCAAGAATTTGCCAACCAGTgtttttccaataaatttgataatggCAAAGGCAGGCAAATGCCTATTCATTATGGGTCTAACAAGCACAACTACTTTACTGTGGCATCAACTGTTGCTACACAAGTTTCCCATGCCGTTGGAGCTGCGTATTCCTTAAAGATGGACGGAAAGGATGCATGTGCTGTCACTTATTTCGGCGATGGTGGCTCAAGTGAGGGAGATGTCCATGCTGCTTTAAACTTTGCAGCAGTTTTAGAAGCTccagttatatttatatgtcgGAACAATGGATGGGCCATAAGCACCCCTACTTCAGATCAGTTTCGAAGTGACGGTGTGGTTGTGAAAGGACAAGCATATGGAGTCCGTAGTATACGTGTAGATGGCAATGATGCACTTGCCATTTATAGTGCTGTTTGTACTGCACGTCAAATGGCAGTTAATGAGAAAAGGCCAATTTTAATTGAGgCTTTAACATATAGAGCTGGACACCATTCAACATCAGATGATTCTACCAAGTATCGTCCTGCCACAGAGATTGAGTGGTGGAGATTAGCACGAGATCCTGTGGCTAGATTTAGAAAGTGGATTGAAAGCAATTGTTGGTGGAATGATAAGGCTGACTTGGAGCTTAGGAGCAGTATCAGACTGCAGTTACTACATGCTATTCAAGTGGCAGAGAAAGTAGAAAAGCCTCCAATTGCAGACATTTTCACCGATGTTTATGATACCCCTCCATCAAATCTCCGTGAACAGGAGCAATGGATTAAAGATTCTATAAAACAACATCCAGGCGAATACCCACCCAATTTTTCTGTCTA 1499 0.4209 MAERVFGVGIVGSSQQFGVAVMRKSTAILSNLKSKLPLMGLGRWGNSAHFHTNTPTQFNRNRIPHLDHNHNQILTSSSFVARRFESNIAQDHLNSTCGSHENLNQALDFPGGTVMFTPELSFISDSPEERIPCYRVLDDNGQPISGNNFGQVNEEVALKIYQDMVTLQTMDTLFYEAQRQGRISFYATTIGEEAINIASAAALTLNDIVFPQYREPGVLLWRGFTLQEFANQCFSNKFDNGKGRQMPIHYGSNKHNYFTVASTVATQVSHAVGAAYSLKMDGKDACAVTYFGDGGSSEGDVHAALNFAAVLEAPVIFICRNNGWAISTPTSDQFRSDGVVVKGQAYGVRSIRVDGNDALAIYSAVCTARQMAVNEKRPILIEALTYRAGHHSTSDDSTKYRPATEIEWWRLARDPVARFRKWIESNCWWNDKADLELRSSIRLQLLHAIQVAEKVEKPPIADIFTDVYDTPPSNLREQEQWIKDSIKQHPGEYPPNFSV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01545 499 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 80 498 - -
Bva05g01545 499 CDD TPP_E1_PDC_ADC_BCADC 160 452 - -
Bva05g01545 499 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 131 494 IPR029061 -
Bva05g01545 499 Pfam Dehydrogenase E1 component 163 459 IPR001017 GO:0016624
Bva05g01545 499 Gene3D - 102 497 - -
Bva05g01545 499 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 80 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01545 Bva-Chr5 12748910 12754443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01545 30 337 Acyl Lipid Metabolism Gene Families AT5G09300 65.605 3.93e-142 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01545 K00166 - gmx:100779198 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01545 05 12748910 12754443 Bva05g01545 05 12748910 12754443 ECH