Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01316 ATGGACTCTGATTCGTGGATTTCTGCTCGCCTCTCGGGTTCTTCGCGGCGCTATCAATCTCGATCTGATCTGTACCATGGTGGGCATGAAGAAATGGATGGAGTTGATGACTTGAGGTCGGAATTTCTCTGCCCTTTCTGCGCTGAGGACTACGATGTCGTTGGGCTGTGTTGCCACATTGACGAGGAGCATCCTGTGGAAGCCAAGACTGGGGTGTGTCCAGTTTGTGAAAAGAAGGTGGGAATGGATCTTGTCAGCCATCTCACCATGCAGCATGGGAATTTTTTGAAGGTGCATCGGAAGAGGAGGTTTAGGAAAACAGGCTCGAGTTCAACATTTTCTATATTGAGAAAGGAGTTGAGAGAAGGAACCTTGCAGTCACTTTTTGGAGGTTCTTCATCCTCCAATTCCGAGCCTGATCATTTGTTgtcatcatttatttataacccAGTCACTGCTGATGAGTCTATCAGTTCACAACGTTCTGCTTCAGCTGAAGCTAccttaataaagaaaatcacaGAAGATGATGTCTCAGAAAGAAAACCCCAACAGTCACAGCTGTCTAGCAAGGATAAAGTAGAGCAGGCTCGGAGGTTTGAGTTCGTCCAAGGGCTGTTGATGTCCACCATTTTAGACGAAAACTTATA 650 0.4415 MDSDSWISARLSGSSRRYQSRSDLYHGGHEEMDGVDDLRSEFLCPFCAEDYDVVGLCCHIDEEHPVEAKTGVCPVCEKKVGMDLVSHLTMQHGNFLKVHRKRRFRKTGSSSTFSILRKELREGTLQSLFGGSSSSNSEPDHLLSSFIYNPVTADESISSQRSASAEATLIKKITEDDVSERKPQQSQLSSKDKVEQARRFEFVQGLLMSTILDENL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01316 216 Pfam Stress-induced protein Di19, C-terminal 114 211 IPR027935 -
Bva05g01316 216 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 214 IPR033347 -
Bva05g01316 216 Pfam Drought induced 19 protein (Di19), zinc-binding 41 93 IPR008598 -
Bva05g01316 216 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01316 Bva-Chr5 6932721 6935610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01316 - - gmx:100499917 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01316 05 6932721 6935610 Bva05g01316 05 6932721 6935610 ECH
Bva05g01316 05 6932721 6935610 Bva13g03260 13 22622367 22625021 ECH
Bva05g01316 05 6932721 6935610 Bva04g03255 04 26343613 26346852 ECH
Bva05g01316 05 6932721 6935610 Bva13g03018 13 21495010 21497879 ECH