Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01305 ATGGCTTATTTGAATAtctgcagaagcagaagctaTAAGTCCCATTCTTCTAGCTTCTGCTTTTTGGTGCTTATTCTCTTGGGTCTTGTGCTGTGTTTTGGCGTTGGGGAAGGGAGGGTGCCATTTGCATGCGACCCCAAGAATGGGCTGACGAGGAGCCTCAAGTTCTGCAGGACTCACGTGCCGATTCACGTGAGGGTGCAAGACCTCATCGGACGGCTGACATTGCAGGAGAAGATACGGTTGATCGTCAACAATGCCATTGCGGTGCCCAGGTTGGGTATTCAGGGGTATGAGTGGTGGTCGGAGGCGCTTCATGGCGTCTCTAATGTGGGCCCCGGAACCAAGTTCGGTGGGGCCTTCCCTGGGGCCACTGCTTTCCCTCAAGTCATCACAACGGCTGCATCTTTCAATGAGTCCCTATGGCAGGAGATCGGACGGGTGGTGTCTGACGAAGCAAGGGCAATGTACAATGGAGGAATGGCTGGTTTGACATTCTGGAGCCCTAACGTGAACATATTCCGGGACCCACGTTGGGGCCGGGGACAGGAGACTCCCGGCGAAGACCCGGTTTTGGCCGGCAAATATGCCGCCAGATATGTTCTGGGACTCCAGGGTGACGGGGCAGGGAACCGGCTCAAGGTTGCTGCTTGTTGCAAACACTACACCGCTTATGATCTCGACAATTGGAGAGGCATAGACAGATTCCATTTCAATGCTAGGGTTAGCAAACAAGACTTGGCGGACACATATGATGTCCCATTCAAAGCCTGCGTGGTGGAAGGGAAGGTGGCCAGCGTCATGTGCTCCTACAATCAGGTCAACGGCAAGCCCACCTGTGCCGATACCGACCTCCTCCTCAACACTATCCGTGGCCAATGGCGCCTCAACGGgtaCATAGTTTCGGACTGTGATTCGGTTGGGGTTCTGTATGACAACCAACACTACACGAGAACACCAGAGGAAGCAGCAGCAAATACAATTAGAGCGGGCCTGGACTTAGATTGTGGGCCCTTCTTGGCGATCCACACGGAATCGGCTATAAGGAAGGGGCTTCTAACCGAGAACGATGTCAACCTTGCCTTGGCAAATCTCATAACGGTCCAAATGAGATTGGGCATGTACGACGGCGAACCATCGGCTCAACCATATGGAAACTTGGGCCCAAGAGATGTTTGCACTCCGGCCCATCAACAACTCGCCCTTGAGGCAGCCAGACAGGGTATTGTTCTATTGCAAAATAAAGGAAACGCGCTGCCGTTATCCCCCACGCGCCACCGCACTGTAGCAGTAATTGGACCCAATTCTGATGTTACCGTTACAATGATAGGAAACTATGCTGgtgTGGCTTGTGGTTATACGACGCCGTTGCAAGGGATTGCTAGGTATGCTAAGACCGTTCATCACGTAGGATGCAGAGATGTTGCTTGTAATAACAAGCAGCTGTTTGGGTCGGCTGAGGTTGCAGCAAGACGGTCTGACGCGACGGTGTTGGTAGTGGGCCTTGACCAATCCATAGAAGCAGAATTCAGGGACAGGGTTGGGATTCTATTACCTGGATACCAGCATGAGCTCGTGACAAGGGCAGCAGGGGCTGCAAGAGGCCCCGTTGTTTTGGTCATCATGTCTGGTGGGCCCGTTGATGTTTCTTTTGCCAAAAACAACCCTAAGATCAGTGCCATTTTGTGGGTTGGCTACCCAGGCCAAGCTGGTGGAACTGCCATTGCTGATGTTATTTTCGGCACAACAAACCCAGGAGGAAAGCTTCCTGTGACATGGTACCCACAAGAGTATTTGGCTAAAGTGCCCATGACAAACATGGACTTAAGAGCAAACCCAGCAAGAGGGTACCCTGGAAGAACCTACAGATTCTACAAGGGTCCAGTAGTGTTTCCTTTTGGACATGGCCTAAGCTACACCAGATTCTCCCACAGCTTAGCCGAAGCTCCCAAACAGGTCTCTGTCCCCTTTGCCACTAGCCTCCATGCCATGAACAACTTCTCAACCATATCAAGCAAAGGAATGAAGACGAGTCACATAAATTGCAACGCACTAGAACTAGGGTTGCACGTAGATGTGAAGAACGAAGGCACCATGGATGGCACTCACACCCTTCTCGTCTTCTCCACCCCGCCGGCGGGAAAATGGTCGGCGGCCAAGCAACTAGTCAGTTTCCATAAAGTTCATGTGCTTGCTGGCTCAAAGCAACGAATCAAAGTTAATGTTCATGTGTGCGAGTACCTAAGTGTTGTGGACAAGTTTGGAATTCGAAGAGTTCCAATGGGTGAACATGAAATTCACATTGGTGATAATCTCAAGCATTCAGTTTCTCTCCAAGTTCCGGAGCAAATCCATTTTTA 2360 0.5072 MAYLNICRSRSYKSHSSSFCFLVLILLGLVLCFGVGEGRVPFACDPKNGLTRSLKFCRTHVPIHVRVQDLIGRLTLQEKIRLIVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATAFPQVITTAASFNESLWQEIGRVVSDEARAMYNGGMAGLTFWSPNVNIFRDPRWGRGQETPGEDPVLAGKYAARYVLGLQGDGAGNRLKVAACCKHYTAYDLDNWRGIDRFHFNARVSKQDLADTYDVPFKACVVEGKVASVMCSYNQVNGKPTCADTDLLLNTIRGQWRLNGYIVSDCDSVGVLYDNQHYTRTPEEAAANTIRAGLDLDCGPFLAIHTESAIRKGLLTENDVNLALANLITVQMRLGMYDGEPSAQPYGNLGPRDVCTPAHQQLALEAARQGIVLLQNKGNALPLSPTRHRTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGIARYAKTVHHVGCRDVACNNKQLFGSAEVAARRSDATVLVVGLDQSIEAEFRDRVGILLPGYQHELVTRAAGAARGPVVLVIMSGGPVDVSFAKNNPKISAILWVGYPGQAGGTAIADVIFGTTNPGGKLPVTWYPQEYLAKVPMTNMDLRANPARGYPGRTYRFYKGPVVFPFGHGLSYTRFSHSLAEAPKQVSVPFATSLHAMNNFSTISSKGMKTSHINCNALELGLHVDVKNEGTMDGTHTLLVFSTPPAGKWSAAKQLVSFHKVHVLAGSKQRIKVNVHVCEYLSVVDKFGIRRVPMGEHEIHIGDNLKHSVSLQVPEQIHF 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01305 786 Gene3D Immunoglobulins 666 785 IPR013783 -
Bva05g01305 786 Pfam Glycosyl hydrolase family 3 N terminal domain 121 366 IPR001764 GO:0004553|GO:0005975
Bva05g01305 786 SMART Fn3_like_2 703 772 IPR026891 -
Bva05g01305 786 Gene3D - 66 383 IPR036962 GO:0004553|GO:0005975
Bva05g01305 786 PRINTS Glycosyl hydrolase family 3 signature 127 146 IPR001764 GO:0004553|GO:0005975
Bva05g01305 786 PRINTS Glycosyl hydrolase family 3 signature 289 307 IPR001764 GO:0004553|GO:0005975
Bva05g01305 786 PRINTS Glycosyl hydrolase family 3 signature 215 231 IPR001764 GO:0004553|GO:0005975
Bva05g01305 786 PANTHER SUGAR HYDROLASE-RELATED 20 780 IPR044993 GO:0009044|GO:0045493
Bva05g01305 786 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 409 642 IPR036881 GO:0004553|GO:0005975
Bva05g01305 786 SUPERFAMILY (Trans)glycosidases 55 408 IPR017853 -
Bva05g01305 786 Pfam Glycosyl hydrolase family 3 C-terminal domain 409 639 IPR002772 GO:0004553|GO:0005975
Bva05g01305 786 Pfam Fibronectin type III-like domain 706 770 IPR026891 -
Bva05g01305 786 PANTHER BETA-D-XYLOSIDASE 1 20 780 - -
Bva05g01305 786 Gene3D - 395 640 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01305 Bva-Chr5 6849470 6854364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01305 22 779 Glycoside Hydrolase AT5G49360 71.859 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01305 - - gmx:100812823 1298.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01305 05 6849470 6854364 Bva05g01305 05 6849470 6854364 ECH