Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01296 ATGGGCGCGCCAGAGAAATCACAGGCCAACGCTAATTCGATGCAGCGTGTCAAGGTCTACCGTCTGAATGAGGATGGGAAATGGGATGACCAAGGAACTGGGCATGTTACGATTGATTATATGGAGCGATCAGAAGAGATgggtttatttgtttttgatgaaGAAGACAATGCAACCATACTTTCGAATCGAATCAGTTCTGATGATATTTACAGGAAACAAGAAGATACAATCATCTCATGGAGAGATCCAGAATTTGCTACAGAACTGGCGCTTAGCTTTCAAGAGACCAGTGGGTGTTCTTATATATGGGACCATATTTGCAGTGTACAAAGGAACATGCATTTCAATACTCTAAATAGTGATGCGTTTAACAGTGTAACCAGTGAGTTGAGGGAGTTACCTGCGGTTGAGCTGTCCACACTTCCTTTAATTCTTAAGACTGTGGTAGAGAGTGGCATTGCGGATCAGGTGCGGCTCATGGATCTAATACTTAGTGATCAAGAATTTTTCCAAAAGCTGTTGGAACTATTCAGAGTTTGTGAAGACTCGGAAAATATGGATGGCCTTCATATGATTTTCAAAATAGTCAAAGGAATCATTTTGCTCAATAGTCCACAAATTTTTGAGAGAATATTTAGTGATGAATCGATTATGGACATTATTGGTGTCCTTGAGTATGATCCAGAGGTTCATCATGTCCAACACCATcgtaatttcttaaaagagCATGTTGTTTTTAAAGAGGCCATACCTATCAAAGATCCTCGTGTGCTATCAAAGATTCATCAGACATACAGAGTTGGTTATTTGAAGGATGTTGTTTTGGCTAGAGTATTGGATGAGGCCACTGTTGCAAGTCTTAATTCCATAATACATTCAAACAATGCCATTgTTGTTTCTTTGTTAAAGGATGACAGTACATTTATCCAGGAGTTGTTTGCTAGGTTAAAATCACCCACAACTTCTCCAGAATCGAAGAAAAATTTGGTCTATTTCTTGCACGAGTTTTGCAGTTTAAGCAAGAGCTTACAGATGGTCCAGCAGCTCCGACTTTTCAGGGATCTTATGAATGAAGGCATCTTTGACATTATCACTGATGTTTTGCAAAGTCAAGACAAGAAGCTTGTGTTGACTGGAACAGATATCctcattcttttcttgaatCAAGATCCTAATCTTCTGCGTTCCTATGTTGTTCAACAAGAGGGAATTACACTTCTCGGACTTTTGGTTAAAGGAATGATAACAGATTTTGGAGATGACATGCATTGCCAGTTTCTTGAGATTCTTCATAATTTATTGGACTCAAGCACACTGTCTGGAGCGCagAGGGACACTATTATTGACATTTTCTATGAGAAGCATTTGGGTCAACTGATCAAAGTAATAACAGAATCCTGCCCTTCACAAGATGTTAATCAAGCAAGCAGCGAATCAGTGGATACTGGCAAAAGAGTTGACTATCAAAGTGGGACAAAGCCAGagattttatcaaacatttgTGAATTACTATGCTTTTGTGTCCTACATCACCCGTACAGGATAAAGTGCAACTTTCTTCTAAATAATGTGAtagacaaaattttgttgctGACTCATAGAAGAGAAAGATACTTGGTGGTTGGTGCTGTCCGGTTTATGCGTACTATTCTTTCCCGCCATGATGAGCAtctgataaattattttgtcagGAACAACCTTCTCAAACCAATTGTAGATGCTTTTGTTTCTAACGGAAATCGTTATAATCTGCTCAATTCTGCAGTTTTAGAACTTTTTGAATATATCCGGAAGGAGAACCTGAAATCATTGTTGAAATATATAGTTGATTCTTTCTGGGACCAGTTGATGAAATTTGAGTATTTGTCATCCATTCACTCGTTGAAAGTGAAATATGAGCAGTGTCTTGATAATGGTGGGATGAAAGGTACTTCTAATGTGACAGACTCCCGAAGAAGAATTGATGAGCGTGCTCTcgagaaagaagaggaagactATTTTAATGAGGACAGTGATGAGGAGGACACAGCTTCTGCTTCCATTCCACGTAGTCAGAAAGGACAGCAGCAACAACCTATTTCCTCTAACGGAGTTGCTGCAAGCTACTCACAGTTAAGTCCAAGGTCTGGTGGACTGGTTGactatgatgatgatgaggatgatGAAGACTACAGACCACCGCCAAGGAAGCAGCTGGAAGCTTCTGAAGAAGACGAAGGAATTATGGAGTCTCTTAGGGTGAAGAGGAAATTGCCTTCCAAAGATAAGGAGCCTGAGTTTGTGAAGAAGCAGAAGTTGTCTAAGAATTCAAAGTCAAAAGATAGCGTTTTTGCTGCCTTGTGTTCAACTCTGAGCCAGGCTGTGCTACCTGGTAAGAAAATAGCAATCAATGTACATGGAAGTCCTCGGACAGCCGAGGGAAGAACGAGCTCAAGCGAAGACAGCCAAGAAAAGGCACCAAATGTTTCTAGAATCGGTTCTGATAATAGCAGCACATCAACTGAAGAGAACCCTGTTGAGAAAGAAACTGCCGCTTCTAGAAACTGTTCTGATCGCTTGCATGGCTCTTCAGATAATAGACAGTTGGGTGGAGAGGACCGTCCACTGGTTCCCCCGAAATCCTCACCAGAGATGGCTGTAAATGGATCATA 2654 0.3866 MGAPEKSQANANSMQRVKVYRLNEDGKWDDQGTGHVTIDYMERSEEMGLFVFDEEDNATILSNRISSDDIYRKQEDTIISWRDPEFATELALSFQETSGCSYIWDHICSVQRNMHFNTLNSDAFNSVTSELRELPAVELSTLPLILKTVVESGIADQVRLMDLILSDQEFFQKLLELFRVCEDSENMDGLHMIFKIVKGIILLNSPQIFERIFSDESIMDIIGVLEYDPEVHHVQHHRNFLKEHVVFKEAIPIKDPRVLSKIHQTYRVGYLKDVVLARVLDEATVASLNSIIHSNNAIVVSLLKDDSTFIQELFARLKSPTTSPESKKNLVYFLHEFCSLSKSLQMVQQLRLFRDLMNEGIFDIITDVLQSQDKKLVLTGTDILILFLNQDPNLLRSYVVQQEGITLLGLLVKGMITDFGDDMHCQFLEILHNLLDSSTLSGAQRDTIIDIFYEKHLGQLIKVITESCPSQDVNQASSESVDTGKRVDYQSGTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVIDKILLLTHRRERYLVVGAVRFMRTILSRHDEHLINYFVRNNLLKPIVDAFVSNGNRYNLLNSAVLELFEYIRKENLKSLLKYIVDSFWDQLMKFEYLSSIHSLKVKYEQCLDNGGMKGTSNVTDSRRRIDERALEKEEEDYFNEDSDEEDTASASIPRSQKGQQQQPISSNGVAASYSQLSPRSGGLVDYDDDEDDEDYRPPPRKQLEASEEDEGIMESLRVKRKLPSKDKEPEFVKKQKLSKNSKSKDSVFAALCSTLSQAVLPGKKIAINVHGSPRTAEGRTSSSEDSQEKAPNVSRIGSDNSSTSTEENPVEKETAASRNCSDRLHGSSDNRQLGGEDRPLVPPKSSPEMAVNGS 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01296 884 PANTHER BINDING PROTEIN-RELATED 1 809 - -
Bva05g01296 884 PANTHER ATP SYNTHASE GAMMA-RELATED 1 809 - -
Bva05g01296 884 MobiDBLite consensus disorder prediction 792 884 - -
Bva05g01296 884 SUPERFAMILY PH domain-like 15 111 - -
Bva05g01296 884 Gene3D - 282 615 IPR011989 -
Bva05g01296 884 MobiDBLite consensus disorder prediction 679 709 - -
Bva05g01296 884 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
Bva05g01296 884 SUPERFAMILY ARM repeat 170 629 IPR016024 -
Bva05g01296 884 MobiDBLite consensus disorder prediction 659 775 - -
Bva05g01296 884 MobiDBLite consensus disorder prediction 804 840 - -
Bva05g01296 884 Gene3D - 10 129 IPR011993 -
Bva05g01296 884 MobiDBLite consensus disorder prediction 724 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01296 Bva-Chr5 6789416 6804712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01296 K17491 - gmx:100786790 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01296 05 6789416 6804712 Bva06g00286 06 4377758 4390525 BWGD
Bva05g01296 05 6789416 6804712 Bva05g01296 05 6789416 6804712 ECH