Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01295 ATGAGTAGTAATAACTTGGAAACACGATCTCTGCTTGATGAGCTTCGTAGCTTTGATAAAGGTGGATTCTTGGACCTTGGCCATCCTCTCCTCAACCGCATCGCTGAGAGCTTCGTCAAAGCTGCCGGGATAGGAGCGATCCAAGCTGTGTCCCGGGAAGCTTATTTCACGGCTGTTGAAGGTACCGGGCTTGAAAATGGGGATGGTATGCCAACAGAGGTTTCGGGTGCCAAGAAACATCGATTCCCAGGTCTCAAAGGAGAGACCAGCAATAAATCCCTTGAGGCCATGGTGAAGAATACAGGAAAGGAGTCCTTACAATGGGGATTGGCTGCTGGAATGTATTCAGGTCTAACATATGGGCTGAAGGAGGCTCGTGGAGCACATGATTggAAAAACAGTGCAGTTGCAGGAGCAATTACTGGTGCAGCACTTGCACTGACCTCAGAAGACTCCTCTCATGAGCAGATTGTGCAATGTGCTATCACTGGAGCTGCGATTTCCACTGCTGCAAATCTTCTCAGAGGGATATTCTA 536 0.4851 MSSNNLETRSLLDELRSFDKGGFLDLGHPLLNRIAESFVKAAGIGAIQAVSREAYFTAVEGTGLENGDGMPTEVSGAKKHRFPGLKGETSNKSLEAMVKNTGKESLQWGLAAGMYSGLTYGLKEARGAHDWKNSAVAGAITGAALALTSEDSSHEQIVQCAITGAAISTAANLLRGIF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01295 178 PANTHER TIM23 3 178 IPR045238 GO:0022857
Bva05g01295 178 Pfam Tim17/Tim22/Tim23/Pmp24 family 31 168 - -
Bva05g01295 178 PANTHER OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC 3 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01295 Bva-Chr5 6786565 6788625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01295 - - qsu:112007333 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01295 05 6786565 6788625 Bva05g01295 05 6786565 6788625 ECH