Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01286 ATGGCGGACAAGTATAATCTTAAGAACCCGGCGGTTAAGCGGATTCTCCAGGAGGTGAAGGAGATGCAATCAAACCCTTCCGAAGATTTCATGAGCATACCTCTTGAGgaaaatatatttgaatggCAATTTGCAATTAGAGGACCCCGTGATTCTGAATTTGAGGGTGGTATTTATCATGGACGAATCCAGTTGCCTGCAGAATATCCATTCAAACCTCCTTCGTTTATGTTATTGACGCCTAATGGTCGTTTTGAGACCCAAACGAAGATTTGCTTGAGCATATCGAATCATCATCCTGAGCATTGGCAACCATCATGGAGTGTAAGAACTGCCCTACTTGCACTGATTGCCTTCATGCCCACCAGTCCAAATGGTGCATTGGGCTCACTAGActacaaaaaagaagagaggcGTGCCTTGGCCATTGAGTCTCGCGAAGCACCCCCAAAATTTGGGACTCCTGAACGTCAAAGACTTATCGATGAGATACATGAATATATGCTAAGCAAGGCACCCCCTGTTCCTCAACTTAGCTCCACACAAGCTGATGAAGGACAACCCAGGAAAGAGGAGGCTGAGGCCCAGGTTAGTTCCCAAAATCATGTGGCTTTACCTGCAGGAGAGGGGCTTTCGGATCAAGCAGGTGACAGAATCGTTGAAGAACAAGAACTCCTTGCAAATGTTAATCCTAACCCCGCAGGAGTTGGAGCTTCAAGAGAGACCCCATCCGGTGTCACAAGCAATCAATTGCCACAGACGTCTGATACAAGGGTTGAAAATCCCAAGCCAGAAACCAGGGTCCAGAAACCTGATGACCGCTTGTTCACACTGGCTGCTATTGGACTTACTATTGCAATTGTGGTCCTTTTGGTGAAGAAGTTCATTAAGTCTACCGAACATGGTGCTTTATTCATGAACGGCTCTTA 929 0.4489 MADKYNLKNPAVKRILQEVKEMQSNPSEDFMSIPLEENIFEWQFAIRGPRDSEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALLALIAFMPTSPNGALGSLDYKKEERRALAIESREAPPKFGTPERQRLIDEIHEYMLSKAPPVPQLSSTQADEGQPRKEEAEAQVSSQNHVALPAGEGLSDQAGDRIVEEQELLANVNPNPAGVGASRETPSGVTSNQLPQTSDTRVENPKPETRVQKPDDRLFTLAAIGLTIAIVVLLVKKFIKSTEHGALFMNGS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01286 309 SMART ubc_7 13 173 - -
Bva05g01286 309 MobiDBLite consensus disorder prediction 228 268 - -
Bva05g01286 309 Gene3D Ubiquitin Conjugating Enzyme 2 183 IPR016135 -
Bva05g01286 309 CDD UBCc 12 151 IPR000608 -
Bva05g01286 309 MobiDBLite consensus disorder prediction 171 210 - -
Bva05g01286 309 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 165 IPR000608 -
Bva05g01286 309 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 309 - -
Bva05g01286 309 PANTHER BNAC01G21910D PROTEIN 6 309 - -
Bva05g01286 309 SUPERFAMILY UBC-like 11 132 IPR016135 -
Bva05g01286 309 MobiDBLite consensus disorder prediction 235 259 - -
Bva05g01286 309 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01286 Bva-Chr5 6755932 6758119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01286 1 307 Miscellaneous Gene Families AT3G17000 63.462 4.09e-132 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01286 K10578 - gmx:100798396 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01286 05 6755932 6758119 Bva05g01286 05 6755932 6758119 ECH