Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01277 ATGGCACTGAGATTTTCCTGCAATACAAAAATTTCACCTCAACATCACGCCAGAGTGAACTCAAGGAGCAAGAATTGTCTTCAAACTGTAAAAAGCCTTGTGAACAGTATCAGGCTTCCTCATATTTCGTCTACTCCACTTGAATCTCTCCAGCAAGGAAACTGGGTCAAGCTCATTTGTGGTGCAAGCTTTGAGGATGTTGTTGATATCAAAAATCTCAGTCTGGTTTACACTCTTGCTGGAGTTGATTGCATTGACTGCGCGGCTGATGCATCAGTGGTTAGTGCAGTAAATGAAGGAATTGAAGCAGCAAGAGATATTAAAGACCTTCGAAGGCCATGGTTGATGATTAGTGTTAATGATGACAAAGATCTTCACTTCCGAAAGGCTGAATTTGATCCAGAGGAATGTCCAGAAAACTGTTCAAGACCCTGTGAAGTTGTGTGCCCGGCTAATGCAATATCATTTGAAGGGAAAACAAGTCACATGACTGGAGTCATAACTGAACGCTGCTATGGCTGTGGTCGTTGCTTTCCTGTTTGCCCCtatgataaaataaGAGAGGTAGCATATGTTAGAGATGCTATTACAACTGCTGATCTTATGAAGAGAGATGATGTTGATGCTATAGAGATACATACAAGTGGGAGGCAGACTACACTTTTCAAAGAACTTTGGGATGCCCTGGGAGATTCAGTAAGGCATGTGAGGCTAATAGCAGTTAGCTTACCTAATGGAGGGGATTCAACATTATCATCTATGAATGAAATGTTTTCAATTATGAAACCTCGTCTACAAAGCTTCAACTTATGGCAGTTGGATGGCCGCCCCATGAGTGGAGATATTGGGAGAGGAGCAACAAGGGAATCAATTGCCTTTGCCGTTCAATTAGCTACTGCAAAAGACAGACCTCCTGGTTTTCTTCAACTGGCTGGTGGAACTAACGCTCACACAATTAATGGGTTGGAGAAAGAGGGTCTTTTTCAGACAACATCAATTACCAatCACTCATATGATGCAACCTCAACAAATTCATCAAATGCCTTGATCGCTGGTGTAGCTTATGGTGGCTATGCACGGAAGATTGTTGGAAGGGTATTGAGATCCTTGCAATCCCAGCACGGTGGAACTGCTTGTATTGAGGATCATCCAGCGTATCTCTTGCAGGCTCTTAAGGAGGCCCTCGCTTTGGTTGGCACTGTTAAACttgtatg 1214 0.4267 MALRFSCNTKISPQHHARVNSRSKNCLQTVKSLVNSIRLPHISSTPLESLQQGNWVKLICGASFEDVVDIKNLSLVYTLAGVDCIDCAADASVVSAVNEGIEAARDIKDLRRPWLMISVNDDKDLHFRKAEFDPEECPENCSRPCEVVCPANAISFEGKTSHMTGVITERCYGCGRCFPVCPYDKIREVAYVRDAITTADLMKRDDVDAIEIHTSGRQTTLFKELWDALGDSVRHVRLIAVSLPNGGDSTLSSMNEMFSIMKPRLQSFNLWQLDGRPMSGDIGRGATRESIAFAVQLATAKDRPPGFLQLAGGTNAHTINGLEKEGLFQTTSITNHSYDATSTNSSNALIAGVAYGGYARKIVGRVLRSLQSQHGGTACIEDHPAYLLQALKEALALVGTVKLV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01277 404 SUPERFAMILY 4Fe-4S ferredoxins 130 192 - -
Bva05g01277 404 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 128 159 IPR017896 -
Bva05g01277 404 Gene3D - 91 203 - -
Bva05g01277 404 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 162 191 IPR017896 -
Bva05g01277 404 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 12 399 IPR013283 -
Bva05g01277 404 Pfam Iron-Sulfur binding protein C terminal 202 399 IPR021039 -
Bva05g01277 404 PANTHER ATP-BINDING CASSETTE SUB-FAMILY E MEMBER 1 12 399 - -
Bva05g01277 404 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 IPR017900 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01277 - - gmx:100804088 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01277 05 6717011 6720068 Bva05g01277 05 6717011 6720068 ECH