Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01271 ATGAATGGGTTTATGATACAATCTCATCTAAAGGCTTATGGATTTTCCCGGTGTAATCAAGGATTCCAAATTTTCCCTGATTCTTATGATGAAAGAATATACTTATACTGTACTACTAAAGTTGTGCCTTACCAGTTCAAACGCTTCGACGTCGTTTCTGATGATTCAGACCACCGCTTCCTGAAATCACAAAATGGGGACGACTGCTTTAGCAATGCAACAAGCGGCGTCTACAAGAGGATCATGAAAGAGTGGAGGATTCTCGATCAGAATCTTCCAGAATCCATCTACGTTCGAGTCTTCGAGAAGCGCATCGATTTGCTCACGGCTGCGATCGTAGGAGCCGTAGGTACACCGTACCACGATGGGCTCTTCTTCTTCGATGTCGCCTTCCCGCCAGATTA 404 0.448 MNGFMIQSHLKAYGFSRCNQGFQIFPDSYDERIYLYCTTKVVPYQFKRFDVVSDDSDHRFLKSQNGDDCFSNATSGVYKRIMKEWRILDQNLPESIYVRVFEKRIDLLTAAIVGAVGTPYHDGLFFFDVAFPPD 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01271 134 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 76 134 IPR000608 -
Bva05g01271 134 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 43 134 - -
Bva05g01271 134 SUPERFAMILY UBC-like 71 134 IPR016135 -
Bva05g01271 134 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38-RELATED 43 134 - -
Bva05g01271 134 Pfam Ubiquitin-conjugating enzyme 80 134 IPR000608 -
Bva05g01271 134 Gene3D Ubiquitin Conjugating Enzyme 30 134 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01271 Bva-Chr5 6677245 6677887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01271 45 133 Miscellaneous Gene Families AT2G33770 56.180 4.73e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01271 K10581 - csin:114279675 148.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01271 05 6677245 6677887 Bva05g01271 05 6677245 6677887 ECH