Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01259 ATGGATATCGACAAGGATTCCAAGAATCTGAAAGCTGAGGACACGCCTATGCAAATGGACTCCGATGACTCTTCCGGCTTTCAAGCAAAGACAaaggacaaagaaaaagaagagctCACGGAGACTATGAACAAACTAAATATTGAGGGATCATCATCTGGAAGTGGAAGTTCATCTGATAAATTTAGAAGAAAGCCGGTCATAATCATAGTGGTGGGAATGGCAGGGAGTGGAAAAACTACGTTTCTCCATAGGTTGGTTACCCACACAGTGCTGTCCAACATTCGAGGTTATGTGATCAATCTTGATCCTGCTGTCATGACACTCCCATATGGTGCTAACATTGATATAAGAGACACTATTCGTTACAAGGAAGTCATGAAGCAGTTCAATCTCGGTCCCAATGGTGGAATTTTGACATCACTTAATTTGTTTGCTACGAAGTTTGATGAGGTAATTTCTGTTATTGAGAAGCGGGCAGATCAGCTTGATTATGTTCTTGTTGATACCCCTGGACAGATTGAGATATTCACTTGGTCTGCTTCTGGTGCTATCATTACAGAAGCTTTTGCCTCCACATTTCCCACTGTAGTCACTTATATAGTCGATACACCTCGTTCAGAAAATCCCACAACTTTCATGAGCAACATGCTTTATGCTTGTAGTATCCTTTATAAAACTCGCCTACCACTTGTCTTGGCATTCAACAAGACTGATGTGGCACAACATGAGTTTGCCTTGGAGTGGATGAAGGATTTTGAGACATTTCAAGCAGCAATAAGTTCAGATCACTCATACACATCAACCTTAACTCAGAGCCTTGCTCTTGTGCTTGATGAGTTCTACAACAACTTAAGATCTGTTGGAGTTTCTGCTGTTTCTGGTGCCGGAGTTCAAGACTTCTTTAAGGCAATTGAATCCAGTGCAGAGGAATTCATGGAAACCTACAAGGCTGATCTTGATAAAAGACGTGCTGAGAAGCAGCGTTTGGAAGAAGAGCGCATGAAGGATAACATGAATAAGCTGAGAAAGGATATGGAGAAATCGGGAGGAGAAACTGTAGTCTTGAGCACTGGTTTGAAGGACAAGGGAAAGAATAGTACAAGCATGATGGATGAGGAAGATGATgtagaagaggaagaggatatcaatgatgatgatgatttggGGAGATTCACCGAAGATGAGGATATTatagatgaagatgaagatgaggaGGTTGGTAGGTTCTCCTTCTA 1238 0.391 MDIDKDSKNLKAEDTPMQMDSDDSSGFQAKTKDKEKEELTETMNKLNIEGSSSGSGSSSDKFRRKPVIIIVVGMAGSGKTTFLHRLVTHTVLSNIRGYVINLDPAVMTLPYGANIDIRDTIRYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYIVDTPRSENPTTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEWMKDFETFQAAISSDHSYTSTLTQSLALVLDEFYNNLRSVGVSAVSGAGVQDFFKAIESSAEEFMETYKADLDKRRAEKQRLEEERMKDNMNKLRKDMEKSGGETVVLSTGLKDKGKNSTSMMDEEDDVEEEEDINDDDDLGRFTEDEDIIDEDEDEEVGRFSF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01259 412 Pfam Conserved hypothetical ATP binding protein 71 309 IPR004130 -
Bva05g01259 412 MobiDBLite consensus disorder prediction 44 60 - -
Bva05g01259 412 Coils Coil 29 49 - -
Bva05g01259 412 Gene3D - 66 324 IPR027417 -
Bva05g01259 412 MobiDBLite consensus disorder prediction 26 43 - -
Bva05g01259 412 CDD GPN1 67 306 - -
Bva05g01259 412 Coils Coil 313 345 - -
Bva05g01259 412 MobiDBLite consensus disorder prediction 372 412 - -
Bva05g01259 412 PANTHER GPN-LOOP GTPASE 30 408 - -
Bva05g01259 412 MobiDBLite consensus disorder prediction 1 18 - -
Bva05g01259 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 307 IPR027417 -
Bva05g01259 412 MobiDBLite consensus disorder prediction 356 412 - -
Bva05g01259 412 PANTHER XPA-BINDING PROTEIN 1-RELATED 30 408 IPR004130 -
Bva05g01259 412 PRINTS Transforming protein P21 ras signature 67 88 - -
Bva05g01259 412 PRINTS Transforming protein P21 ras signature 287 309 - -
Bva05g01259 412 PRINTS Transforming protein P21 ras signature 227 240 - -
Bva05g01259 412 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01259 Bva-Chr5 6589609 6592849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01259 K24104 - qsu:111983141 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01259 05 6589609 6592849 Bva05g01259 05 6589609 6592849 ECH