Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01256 ATGAGGCTCTCAGTCTCACCTTCTATGTTTGCTCCTTTTGCACTTGTTCACATTATTATCCTTGTTTCCATTCTCTTACTCCCATTAACCCAATCTTCCACCCTTGAGAAAAATGGCAATGGCGATTTAATAGACCAAATATGCAAAAAGACACCCTTTTATGACCTTTGCAGCTCTACCCTCCATTCAAACCCTTTAAGCCCCAAAACTGATATCAAAGGCCTTGCCCTTATAATGGTCAATAACATTTTGGCCAACGCCACTGACACACTCAGTTACATTGAGGGGCTAATCAAGCAAGCCCCAGATCGTAAAATGGAGCAAGTTTTGGCCTTTTGTGCAGAATCGTATATTCCTGTTGTCAAATACATTCTCCCTCAAGCTGCTGATGCTATAAGCCAAGGTCGATTTGGATTTGCAAGTTACTGCATAGCTGATGCTGAGAAAGAAGTCGATGCTTGTGACAAGAAATTCTCTGGCGTGGTTCAGCCACCTTTGAGTGATAGGAATGACATTGTGCAGAAGCTTGTGGATGTGGCTACTTCTTTGATCAAACTGTTATTGAAAGGTTG 572 0.4213 MRLSVSPSMFAPFALVHIIILVSILLLPLTQSSTLEKNGNGDLIDQICKKTPFYDLCSSTLHSNPLSPKTDIKGLALIMVNNILANATDTLSYIEGLIKQAPDRKMEQVLAFCAESYIPVVKYILPQAADAISQGRFGFASYCIADAEKEVDACDKKFSGVVQPPLSDRNDIVQKLVDVATSLIKLLLKG 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01256 190 Pfam Plant invertase/pectin methylesterase inhibitor 42 182 IPR006501 GO:0004857
Bva05g01256 190 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 188 IPR035513 -
Bva05g01256 190 SMART PMEI_2 39 183 IPR006501 GO:0004857
Bva05g01256 190 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 187 IPR035513 -
Bva05g01256 190 TIGRFAM PME_inhib: pectinesterase inhibitor domain 17 187 IPR006501 GO:0004857
Bva05g01256 190 CDD CIF_like 42 187 IPR034087 GO:0004857|GO:0043086
Bva05g01256 190 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 190 - -
Bva05g01256 190 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 15 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01256 Bva-Chr5 6576143 6576988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01256 - - gmx:100527840 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01256 05 6576143 6576988 Bva05g01256 05 6576143 6576988 ECH