Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01255 ATGACAAACTCAAAGTCCctaatccttttcttcttctttcaagCTCTTCTCGCTTTCATTTCATTACCAATAAGCCAAAGCAGAACGGTGTTCCCCAACGATGACGACCTCATAAACGAGGTATGCGGGAAAACATACGATACCGAAGGTTGCATCCAAACCCTAAAATCAGACCCTCGAAGCGCCAAAGCAGACACAAGAGGGTTGGCTGTGATCATGGTAGATGCCATGAAACCCAGAGGAAACGATGCGTTAAACAAAATCAACGAGCTTCTTAAGAGAAACCCTCCACCTGGGATTAGGGATCCTCTGAGGTATTGTGTTTCCATGTATACAGAGATTCTGAACCAGAATATTGCTGAAACTGCTCAAGCTCTCAACGGTGGAGATTTTAAGACTGCAGAATATAAGGCTAATGAGATTAGTATAAAGAGCAACAGGTGTCAGCAGACTTTCGCCGCCGGAAACCCACCGCTTGAGTCACCTATCACTGATAAGAACGATGCAATgtatttcttccttttggcTAAAGGCAAACCTAATTCAGGTCCCACTTGCTTGCACGTAAGCAATTCATCTCCTACCTATAAAAGGGCCGTAGCCTTAGCAGCACAAGTTGTCACCATAAACTCATCAATTCTTCAGCAGCTCAATCCACTCTTAATTAGCCTCTCTACCTATCTCTTTCTATCAAAGATGACAGCTTCCAACTCTCTAGCtctcatcttcatcatccaAGCTCTTCTTCTCGCAACCTTCTCAGTCTCATTAACCCACAGCAGAACCACACCTCCAAACGACGTCGCATTCATCAAAGCAACCTGCAAGAGAACACCCAATTACGATGTCTGCGTTCAATCTCTCATGTCTGACCCGAAGAGCTCCCAAGCTGGTGATGTCACAGGGTTAGCTCTAATCATGGTCAATGTCATGAAGTCCAAAGCCAACGATGCTCTTGATAAGATTAATCACATTCTTCGGAAAGGCAGAGATCCTACTCACAAACATGCTTTGAGAGAATGTGCTGACAACTACAAAACAGTTCTAGAAGCAGATATTCCAATGGCCATTGAAGCCCTTAAAAAAGGGAACCCGAAATTTGCAGAAGATGGGGCAAATGATGCTGCTATTGAGGCCAAATCTTGTGAGGATGATGAATTTGGTGGGAAATCTTCACTTACTccttataacaaaattatgcATGAGGTTTCTGTCGTTACTGCAGCTATTGTCAGAAATTTACTCTA 1247 0.4122 MTNSKSLILFFFFQALLAFISLPISQSRTVFPNDDDLINEVCGKTYDTEGCIQTLKSDPRSAKADTRGLAVIMVDAMKPRGNDALNKINELLKRNPPPGIRDPLRYCVSMYTEILNQNIAETAQALNGGDFKTAEYKANEISIKSNRCQQTFAAGNPPLESPITDKNDAMYFFLLAKGKPNSGPTCLHVSNSSPTYKRAVALAAQVVTINSSILQQLNPLLISLSTYLFLSKMTASNSLALIFIIQALLLATFSVSLTHSRTTPPNDVAFIKATCKRTPNYDVCVQSLMSDPKSSQAGDVTGLALIMVNVMKSKANDALDKINHILRKGRDPTHKHALRECADNYKTVLEADIPMAIEALKKGNPKFAEDGANDAAIEAKSCEDDEFGGKSSLTPYNKIMHEVSVVTAAIVRNLL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01255 415 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 20 170 - -
Bva05g01255 415 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 254 414 - -
Bva05g01255 415 PANTHER PECTINESTERASE INHIBITOR-LIKE 20 170 - -
Bva05g01255 415 PANTHER PECTINESTERASE INHIBITOR-LIKE 254 414 - -
Bva05g01255 415 CDD CIF_like 271 414 IPR034087 GO:0004857|GO:0043086
Bva05g01255 415 SMART PMEI_2 266 410 IPR006501 GO:0004857
Bva05g01255 415 SMART PMEI_2 33 170 IPR006501 GO:0004857
Bva05g01255 415 Gene3D Invertase/pectin methylesterase inhibitor family protein 267 415 IPR035513 -
Bva05g01255 415 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 175 IPR035513 -
Bva05g01255 415 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 170 IPR006501 GO:0004857
Bva05g01255 415 TIGRFAM PME_inhib: pectinesterase inhibitor domain 247 414 IPR006501 GO:0004857
Bva05g01255 415 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 269 414 IPR035513 -
Bva05g01255 415 Pfam Plant invertase/pectin methylesterase inhibitor 36 170 IPR006501 GO:0004857
Bva05g01255 415 Pfam Plant invertase/pectin methylesterase inhibitor 270 403 IPR006501 GO:0004857
Bva05g01255 415 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 171 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01255 Bva-Chr5 6571897 6574637 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01255 - - gmx:100306719 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01255 05 6571897 6574637 Bva05g01255 05 6571897 6574637 ECH