Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01253 ATGGAAGCAGCGCATGCTTACCCATCTGAAAGTGCCCCGGTTTTCGTTCATCCTAATCGGTTTCTTGTTTATCCTCAAGCTGGCAATCCCAATATTCTCATCGTGCCTCCCCCATTTTTGGTCATTGACCCTTCTGTGCCACCACCATCACCCTCTGGGGTGCTGGTCCCCTTCAATCCACCTATAGGTACTATGAATCCAGCTCTACTTAGGAGAATCGACGAAGAAAGGTCAATGTCTCTGCTTCAGTTCATGGCGAATGAAGGACTTGTTCCATCGCCGGAGGAAGAACAGAAGCGGGATAATGCAATTCAGAAGCTTAAACAGATAGTTTCGTCCTGGATCAAGAAGGTTGCATGGCAACGTAGACTTCCAAAGCACCAGATTGCTGTTACTTCTGCCACCATATTGACTTATGGGTCTTATGGCCTTGGAGTTCACAGTCCCGAGTCTGACATTGATGCTTTGTGTGTCGGTCCTTTCTTTGCCACCATTGCAGAGGACTTTTTTGTTGTTCTGCACAACATGCTTAAAAGAAGACCTGAAGTATCAGAGATTCACTGTGTCAAGAGTGCAAAAGTCCCACTTATGCGGTTTAAATTTGATGGAATTTCCATTGATCTTCCATATGCCCGACTTAAAGTATTATATGTTCCTGAGAATGTTGACATACTAAACCCGTTCTTCCTGAGGAACATTGATGAAACCAGCTGGAAAAGCTTGTCTGGTGTGCGTGCAAATAAACGAATTCTTCAGCTTGTTCCAAATGTAAAGAATTTTCAGTCTATGTTGCGTTGTCTTAAATTATGGGCTAAAAGACGAGGAGTGTATGGAACTTTACTTGGCTACTTGGGAGGAGTTCATTTGGCAATTCTTGCTGCTTATGTTTGTCAAAGATATCCTGATGCCAGCTTCAATGCTCTAATTATGAACTTTTTCCGAACATTCGCCTTTTGGCCCTGGCCTACACCAGTCATGCTGAATGAAGGAATGTATCCGTCAACTGCAGACATTATAGAGACACGGTCCTTGATGCCTATTCGACTTCCTTCTAGCCCTTACGAGTATTGCCATTCTAATATAACAAGAAGCACATTCTATAGGATTAGGACCGAGTTTGTCCGTGGCCATCATATAACAAggGATGTTTTGAAGCCAAACTTCAGTTGGGATAGTGTATTCGAGCATTTTCCATACTCAAGAAGATACTCCCAATTTGTCAAGATTTACCTATCTACTCTTAATCAAGATGAGCTTGGAGACTGGGTTGGTTGGGTCAAGTCACGCTTCCGTGGTCTTCTTCTCAAGCTAGAGGAGGAGGTTCAAGGATTTTGTGACCCTAACCCTACAGAATATGTTGATACCGAGAAGACTGAGCCAAACATGGTTTTCTTCTGGGGCTTACAACATAACAGGAATAACCTTGTGGACATAAACTTGGTGGAGGGGGAATTCTTGAAGAATATCAGCAATGGCTTTGACGGTAATCCTGGGAAGATGGAACTATCTATAGTGCTAGCTTCTCAGTTGCCCAAGAATGCTAAGTTTGATAATGGTAGTGTCAAGGGCTCCACAAAATCATATTGGAAGATAGTTGAGTATGATAAGAAAAGGAGTCCACCTTGCCTTGTTGGCCGTGTGGCAGTAGATGGAGAAGAAGCAGATTGCCCGGGTTCTGGGGATAGATA 1688 0.4342 MEAAHAYPSESAPVFVHPNRFLVYPQAGNPNILIVPPPFLVIDPSVPPPSPSGVLVPFNPPIGTMNPALLRRIDEERSMSLLQFMANEGLVPSPEEEQKRDNAIQKLKQIVSSWIKKVAWQRRLPKHQIAVTSATILTYGSYGLGVHSPESDIDALCVGPFFATIAEDFFVVLHNMLKRRPEVSEIHCVKSAKVPLMRFKFDGISIDLPYARLKVLYVPENVDILNPFFLRNIDETSWKSLSGVRANKRILQLVPNVKNFQSMLRCLKLWAKRRGVYGTLLGYLGGVHLAILAAYVCQRYPDASFNALIMNFFRTFAFWPWPTPVMLNEGMYPSTADIIETRSLMPIRLPSSPYEYCHSNITRSTFYRIRTEFVRGHHITRDVLKPNFSWDSVFEHFPYSRRYSQFVKIYLSTLNQDELGDWVGWVKSRFRGLLLKLEEEVQGFCDPNPTEYVDTEKTEPNMVFFWGLQHNRNNLVDINLVEGEFLKNISNGFDGNPGKMELSIVLASQLPKNAKFDNGSVKGSTKSYWKIVEYDKKRSPPCLVGRVAVDGEEADCPGSGDR 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01253 562 CDD NT_PAP_TUTase 99 213 - -
Bva05g01253 562 PANTHER NUCLEAR POLY(A) POLYMERASE 3 60 530 - -
Bva05g01253 562 Gene3D Poly(A) polymerase predicted RNA binding domain 399 505 - -
Bva05g01253 562 Pfam Poly(A) polymerase central domain 71 395 IPR007012 GO:0004652|GO:0043631
Bva05g01253 562 PANTHER POLY A POLYMERASE 60 530 - -
Bva05g01253 562 Pfam Nucleotidyltransferase domain 133 202 IPR002934 GO:0016779
Bva05g01253 562 SUPERFAMILY PAP/OAS1 substrate-binding domain 255 395 - -
Bva05g01253 562 Gene3D Beta Polymerase, domain 2 92 248 IPR043519 -
Bva05g01253 562 Gene3D - 71 394 - -
Bva05g01253 562 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 398 512 IPR011068 GO:0003723|GO:0016779|GO:0031123
Bva05g01253 562 SUPERFAMILY Nucleotidyltransferase 68 251 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01253 Bva-Chr5 6564337 6568385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01253 K14376 - jre:109010780 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01253 05 6564337 6568385 Bva05g01253 05 6564337 6568385 ECH