Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01251 ATGGTGATCTTCGGTCCGGTGACTCCTGGTCAGGTTTCGTTCTTGCTCGGAATCGTTCCAGTCATTGTGGCATGGATTTATTCAGAGATATTGGAGTATCGGAAGAATTCAACCTCTTCGAAAGTGCGTTCAGACGTTAATTTAGTTGAAATGGCTGCTgtcaaagaagaagataaagcaGTTTTATTAGAGGGGGGAACTCTGCAGTCATCCTCCACAAAAGCCCAAAGCTTAACTGGCTCATCACCTATCATCAGaTTCCTTTTGATGGATGAATATTTCTTGATTGAAAACCGTTTGACACTTAGAGCAATATCTGAATTCGGAATCATTTtagcttattattatttgtgtgATCGCACAGATTTCTTTGGATCATCGAAAAAGAGTTACAATAGGGAtctcttcttatttctctATTTCCTTCTCATCATAGTTTCGGCAATGACTTCTTTTACAATACATCATGACAAGTCACCGTTCTCTGGGAAATCCATACTTTACTTGAACAGGCACCAGACTGAAGAATGGAAAGGCTGGATGCAGgttttgtttttgatgtACCATTACTTTGCTGCAAGTGAAATCTATAATGCTATTCGTCTGTTCATTGCTGCATATGTCTGGATGACTGGATTTGGGAActtctcatattattatgttCGTAAAGATTTTAGCCTAGCAAGGTTTGCTCAGATGATGTGGCGGCTTAATTTCTTGGTCTTTTTTTGCTGTATCGTTCTTGACAACAGTTACATGTTGTACTACATTTGTCCCATGCACACTCTTTTCACTCTTATGGTTTATGGGGCCCTTGGTATTCTTAACAAGTACAACGAGATTGGGTCAGTCATTGCTGCCAAAATCATTGCTTGCTTCTTGGTTGTTATTCTATTATGGGAGGTTCCTGGTGTCTTTGAATGGGTTTGGAGCCCATTTACTTTCCTGCTTGGTTATACAGATCCTGATCCTTCAAAATCGCATTTTCCCCGCTTGCATGAATGGCATTTTCGCTCTGGGCTTGACCGCTACATATGGATAATTGGAATGATTTATGCTTATTATCATCCAACGATTGAAAGATGGATGGAGAAACTGGAGGAAACAGAAATCAAGCGTAGAATATCAATCAAATCTGCTGTTGTGATAACATCTTTACTGATGGGTTATTTTTGGTACGAGCACATATACAAGCTGGACAAGCTTTCTTACAATAAATACCATCCATACACCTCGTGGATTCCTATAACGATTTACATATGCTTGCGAAACGTTACTCAGAGTTTCCGTAGCTACAGTTTGACCCTTTTTGCATGGCTTGGAAAGATTACACTGGAAACCTACATCTCCCAGATCCATATCTGGTTAAGgtcGGGTATTCCAGATGGTCAACCCAAATTGTTGCTTTCTATGATCCCAGACTATCAAATGTTGAACTTTATGCTCACCACTGCCATATATATAGCAATTTCTTATCGGTTCTTCCAGCTGACAAATACACTAAAAACGGCATTTGTACCCAGCAAAGACAACAAACGCCttttatacaatataattACAGCATCAACAATCTCAGTTGTTTTATACTCCTTGTCCTTTCTGTTCCTGAGGATACCTCAAATGTGGgtttg 1631 0.3752 MVIFGPVTPGQVSFLLGIVPVIVAWIYSEILEYRKNSTSSKVRSDVNLVEMAAVKEEDKAVLLEGGTLQSSSTKAQSLTGSSPIIRFLLMDEYFLIENRLTLRAISEFGIILAYYYLCDRTDFFGSSKKSYNRDLFLFLYFLLIIVSAMTSFTIHHDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFLVFFCCIVLDNSYMLYYICPMHTLFTLMVYGALGILNKYNEIGSVIAAKIIACFLVVILLWEVPGVFEWVWSPFTFLLGYTDPDPSKSHFPRLHEWHFRSGLDRYIWIIGMIYAYYHPTIERWMEKLEETEIKRRISIKSAVVITSLLMGYFWYEHIYKLDKLSYNKYHPYTSWIPITIYICLRNVTQSFRSYSLTLFAWLGKITLETYISQIHIWLRSGIPDGQPKLLLSMIPDYQMLNFMLTTAIYIAISYRFFQLTNTLKTAFVPSKDNKRLLYNIITASTISVVLYSLSFLFLRIPQMWV 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01251 543 Pfam 10 TM Acyl Transferase domain found in Cas1p 99 512 IPR012419 -
Bva05g01251 543 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 7 540 - -
Bva05g01251 543 PANTHER PROTEIN REDUCED WALL ACETYLATION 2 7 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01251 Bva-Chr5 6551041 6557907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01251 K03377 - gmx:100794337 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01251 05 6551041 6557907 Bva05g01251 05 6551041 6557907 ECH