Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01248 ATGGCTCGAAAGGGTAATCAACCGAAGAATGGACTGGGCCATCATGGGTTGGATCACAGAAAGGGCGTTTCTGGGGGTGTTCTTCCTGGTAAGAAAGGACAAACTAAAGGGGGTCAGGTGAAGGTTTTTCCTGGAGATGATCTCCCAAATGGCAGTCAAACAAGCAGTGTTTCACAGAATATAAGTGAAATTAGTTCTGCAGGTGTTGAGTATAACAATGAGCGAAAACCTGAGAAGCTTTCAAGGAAAGAGAAGCAAAGGATGGTTGCAAATCATGACCTAGAGGAACCAACATCTTTCCAGAGTAATCCATGGGGTGGAAGTCAGGATAATGAAGTTCCCATAcgagaagaaaacaagatgTTCCCTAGAAGTAATCAAGgtcaacaaaatcaaaagagtAGATTGAGCTGTTTGCTGAATGGATTGCACACAAAAAGTGTGATGGAAAAAGTAGAGCTTATTGATAGTAtgattattagaaaattaaggtCATTGACATCTTCCATGTTTGCATCAGTTACTGAGTGGCTATTAAGACAGAAGCCATTATTTGTATCTCTTACAACCGGCATCTTGAAAGCTCGTGATCTttttagaatgaaaattgaaCAAGCTTATCCCATAGTACTGAAATGGATCATGAATTTTGGGaatattattcttcttttatcacttttttgGTTGGACTGTGCTGTCAGGGGTATTGATTCCTTTGTACACATGGGGACTGCATCCTTCTTCTCTGTTGTATGGTGCAGCATATTCTCAGTGATCAGTACAATAGGGATGCTCAAATTTCTTATTGTGTTGGTCTTCGCTGCTTCGATTGGACTTTTCATGGGGCTGACTCTTGTGATTTTGGTAGTTGCAATCCTTGGACTAGCTTTCTTGTGGTTTTATGGCAGCTTTTGGACAACTTCATTTGTCATCTTCCTTGGAGGATTGGCATTTATGTTGAGCCATGAACGTGTTGCACTCCTGATCACCACAATGTATTCTGTCTACTGTGCATGGATGTACATTGGGTGGCTTGGTTTGCTATTGGCTttgaatttatcttttatgtcCAGTGATGTTCTGATGTACTTCCTCAAGAATAAcacaaatcaaaatagaagATCAAATGTTTCTCCTGGACAAAGAGCTGGAATGGAAGGTCAACCAGGGTTTTTTAATGATGATCCAATGCAAGCTTCCTCTTCTGAAAATGGACCACGACCATTTGCAGATCGTAGTGGAGGAGTCCCTTCAACTAGTGGGGCTGATTCTGAGATTTCTTCTGAAGATGAAGTTGTCCGTTTATTGAACTGCTCTGATCATTACTCAGTATTAGGCTTGACACGATATCAGAATATAGATGTTTCACTACTGAAGCGGGAATACAGGAAAAAGGCGATGTTGGTGCATCCTGATAAAAATATGGGCAATGAAAAGGCTGCAGAAGCTTTCAAGAAACTTCAGAATGCATACGAGGTACTAATAGACTCCTTGAAGCGGAAAGCATATGATGATGATTTAAGGAGGGAGGAGCTGTTGAGTCTATTTCGCCAGTTTCAGAGTACTTCTCATAGGAATGGTCGGCATGGATTCTTTGCTTCAGGATTTGCTCCGTCAGATGCAGATGGTGAGGATTCATTTGGAAATTCAAGGCAAATAGCCTGCAAAAAGTGTGGTAACTTTCATGTTTGGATATACACCAAGAAACAAAAGTCTCGAGCAAGATGGTGTCAGGATTGCCAAGATTTTCATCAAGCAAAAGATGGTGATGGGTGGGTTGAACAATCATCCCAACCGTTTCTTTTTGGCTTATTACAGAAGGTAGATGCTCCTTGTGCATACGTGTGTGCTGATAGCAGGATATATGATGCCACTGAATGGTATATCTGTCAGGGAATGAGATGCCCAGCAAACACTCATAAACCAAGTTTTCATGTGAACACTAGTGTAACATCCAAGCATAGTTCTGGAAAGGGAACAACTTCAGATCAAAGAGGTCGAATGCCAACACATAACATGGAAGAAACCATGACAGAGGAAGAACTTTTTGAGTGGTTGCAGAATGCGGGACAGGCAGGCGCGTTTGACAATTTTGGCAGTGGCACTGCCCCTGAGAGCCCACCTACAAGAGCTGGAAGTGGGAACAAAAATCCTGGCAGTGGtggcaagagaaagaaaaaggggaagaaCAAATGGTG 2198 0.3954 MARKGNQPKNGLGHHGLDHRKGVSGGVLPGKKGQTKGGQVKVFPGDDLPNGSQTSSVSQNISEISSAGVEYNNERKPEKLSRKEKQRMVANHDLEEPTSFQSNPWGGSQDNEVPIREENKMFPRSNQGQQNQKSRLSCLLNGLHTKSVMEKVELIDSMIIRKLRSLTSSMFASVTEWLLRQKPLFVSLTTGILKARDLFRMKIEQAYPIVLKWIMNFGNIILLLSLFWLDCAVRGIDSFVHMGTASFFSVVWCSIFSVISTIGMLKFLIVLVFAASIGLFMGLTLVILVVAILGLAFLWFYGSFWTTSFVIFLGGLAFMLSHERVALLITTMYSVYCAWMYIGWLGLLLALNLSFMSSDVLMYFLKNNTNQNRRSNVSPGQRAGMEGQPGFFNDDPMQASSSENGPRPFADRSGGVPSTSGADSEISSEDEVVRLLNCSDHYSVLGLTRYQNIDVSLLKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEVLIDSLKRKAYDDDLRREELLSLFRQFQSTSHRNGRHGFFASGFAPSDADGEDSFGNSRQIACKKCGNFHVWIYTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPCAYVCADSRIYDATEWYICQGMRCPANTHKPSFHVNTSVTSKHSSGKGTTSDQRGRMPTHNMEETMTEEELFEWLQNAGQAGAFDNFGSGTAPESPPTRAGSGNKNPGSGGKRKKKGKNKW 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01248 732 MobiDBLite consensus disorder prediction 48 69 - -
Bva05g01248 732 Pfam Cleavage inducing molecular chaperone 550 647 IPR032843 -
Bva05g01248 732 PANTHER OS03G0832900 PROTEIN 1 732 - -
Bva05g01248 732 PRINTS DnaJ domain signature 462 477 IPR001623 -
Bva05g01248 732 PRINTS DnaJ domain signature 479 499 IPR001623 -
Bva05g01248 732 MobiDBLite consensus disorder prediction 646 669 - -
Bva05g01248 732 Gene3D DnaJ domain 428 522 IPR036869 -
Bva05g01248 732 Pfam DnaJ domain 440 504 IPR001623 -
Bva05g01248 732 SUPERFAMILY Chaperone J-domain 435 532 IPR036869 -
Bva05g01248 732 MobiDBLite consensus disorder prediction 394 426 - -
Bva05g01248 732 MobiDBLite consensus disorder prediction 702 716 - -
Bva05g01248 732 MobiDBLite consensus disorder prediction 692 732 - -
Bva05g01248 732 MobiDBLite consensus disorder prediction 1 85 - -
Bva05g01248 732 SMART dnaj_3 439 499 IPR001623 -
Bva05g01248 732 PANTHER OS03G0832900 PROTEIN 1 732 - -
Bva05g01248 732 ProSiteProfiles dnaJ domain profile. 440 507 IPR001623 -
Bva05g01248 732 CDD DnaJ 440 496 IPR001623 -
Bva05g01248 732 ProSitePatterns Nt-dnaJ domain signature. 484 503 IPR018253 -
Bva05g01248 732 MobiDBLite consensus disorder prediction 646 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01248 Bva-Chr5 6537477 6543307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01248 1 697 Miscellaneous Gene Families AT5G49580 51.994 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01248 K09534 - gmx:100789594 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01248 05 6537477 6543307 Bva05g01248 05 6537477 6543307 ECH