Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01240 ATGTCCAAAAACATCTCAAATGACCCATCAAAGTTCAGCTCTAGTGTGAGTGGTTACACAGAGGCAGTGAGGGAGCTGGCATGTGAGATTTTGGAGCTGATGGCAGAGGGATTGGGGGTCCATGATACATTGGTGTTCAGCAGCTTGATCAGGGACCTTGATAGCGACTCCATCCTGAGGCTGAATCACTACCCACCTATTACTATTCGAGACTGCAAGGATAGAGACAGGTCCTCCACTTACAACCATTCCAGTGTTGGATTTGGAGAGCATACTGACCCTCAGATCTTGACCATCTTGAGATCCAACGATGTTGGTGGCctgcaaatctctcttcaagATGGTGTGTGGATCCCAGTCACCCCTGATCCCTCTGCTTTCTGTGTTAATGTGGGTGATGTTCTAGAGGTTATGACAAATGGAAGATTTTCAAGTGTAAGGCACAGGGCTATGACCAACTCATCAAAGCCTAGAATGTCAATGGCATATTTTGGGGCTCCACCACTGAATGCCTGGATAGTTGCTCCTCCAGATGTGGTTACTCCACAGAGGCCATCTCTCTACAGGCCATTAACTTGGGCTGAATACAAGAAAGCCACCTACTCTCTAAGgcttggagctactcgaattGGCCTTTTCAGGAAGTG 647 0.4498 MSKNISNDPSKFSSSVSGYTEAVRELACEILELMAEGLGVHDTLVFSSLIRDLDSDSILRLNHYPPITIRDCKDRDRSSTYNHSSVGFGEHTDPQILTILRSNDVGGLQISLQDGVWIPVTPDPSAFCVNVGDVLEVMTNGRFSSVRHRAMTNSSKPRMSMAYFGAPPLNAWIVAPPDVVTPQRPSLYRPLTWAEYKKATYSLRLGATRIGLFRK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01240 215 Gene3D - 2 204 IPR027443 -
Bva05g01240 215 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 214 - -
Bva05g01240 215 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 54 167 IPR005123 -
Bva05g01240 215 SUPERFAMILY Clavaminate synthase-like 6 206 - -
Bva05g01240 215 PANTHER PLANT GIBBERELLIN 2-OXIDASE 1 214 - -
Bva05g01240 215 Pfam 2OG-Fe(II) oxygenase superfamily 56 165 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01240 Bva-Chr5 6507412 6511006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01240 19 214 Glycosyltransferase AT5G59530 33.333 1.35e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01240 K04125 - gmx:100783917 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01240 05 6507412 6511006 Bva05g01240 05 6507412 6511006 ECH