Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01239 ATGACTACTTGTAGCTGTGTTGGAATCTCTACCATGAAGCCTTGTCGTAAGATCTTAAGTAGCTATAAAAGCTCCTCACTTTTTGGCTTTTCTCCAACCAAGCTCGATGATTCAGTCATGGAGCTTTTGTCCAGATCACATCCTAAACCAATTCATCGCCGTAGATACAATACCTGTAATAAGCAAGTTGTAGGGTACATACGTGTGGTCAATTTGAATCAGACAGATTTTAATATTCCTGATTCAAATTGGGGTAAATCTAGGACTTTTAGGACTAGTTATTATGTCAATATAGGTAGTACTAGGAATAGGAGTGTTTCATTTATACCCAACATAGCTTCTGATACTAGAAATCATTCTACATCAATTGATTCTCGTGCAAATGAGACAAGCTTTGAGAAGATTTACATTCAAAATGGCTTGAAAGTGAAGCCATTGGTCTTTGAAAGAATTGAGACTGGTCCAAGTCAATTGGAAGAAGTCTCTCGAGAAGATgtaaatatagataatttgaAGGATTTGAATGAGAGGAAGCAGTCTGAGATTGAAAAAGAAGCATGGCAGCTACTTCGAGCTGCTCTCGTTACTTATTGTGGGAATCCAGTTGGGACTGTTGCAGCTAATGATCCATCTGACAAACAACCACTGAATTATGATCAAGTCTTCATCCGTGATTTTGTTCCATCAGCACTTGCCTTTCTGCTCAATGGTGAAGGGGAGATTGTCAAGAATTTTTTACTTCACACATTGCAATTGCAGAGCTGGGAAAAGACTGTTGATTGCTACAGCCCTGGGCAAGGGTTAATGCCTGCGAGCTTCAAAGTTAGAACTTTGCCACTTGATGGAAACAATGAAGCATTTGAGGAAGTTTTGGATCCTGATTTTGGTGAATCAGCAATTGGCCGTGTTGCACCTGTTGATTCTGGATTGTGGTGGATTATCCTGTTGAGAGCTTATGGGAAGCTCACAGGTGACTATGCTTTGCAAGAAAGAGTGGATGTACAGACGGGCATAAGGCTGATTCTTAAGCTTTGTCTGACTGATGGATTTGACATGTTTCCAACTCTATTGGTATCTGATGGTTCCTGCATGATTGATAGACGGATGGGCATTCATGGTCACCCTCTTGAGATCCAAGCGTTATTCTACTCAGCTTTGCGCTGCTCTCGTGAGATGTTGACAGTCAATGATGCAACCAGTACCCTTGTGGCTGCTATTAATAATCGCCTCAGTGCACTCTCCTTTCACATGAGAGAGTATTATTGGGTCGatatcaagaaaattaatgaaatttatcgTTTTAAGACTGAAGAGTATTCTACTGATGCTGTCAACAAGTTTAACATCTACCCAGAGCAAGTCCCCTCTTGGCTAGTAGACTGGATCTCTGACGAAGGTGGCTACTTCATTGGCAATTTGCAACCTGCTCATATGGATTTCAGGTTTTTCACACTTGGGAACCTTTGGGCAATTGTTTCTTCTTTAGGCACGACAAAACAGAACAGAggcattttgaatttaatagaGGCAAAATGGGATGATCTTGTTGCTGAAATGCCTCTCAAGATATGTTATCCAGCACTGGAGGGGGAGGAGTGGCGCATAATCACTGGCAGTGACCCCAAGAACACACCATGGTCATACCACAATGGTGGATCCTGGCCAACACTTCTCTGGCAGTTCACGTTAGCCTGCATCAAGATGGAAAGGCCTGATTTGGCACAGAAGGCTTGTGATTTGGCAGAGAAAAGGCTTTCTATAGATAGATGGCCAGAGTACTATGATACCAGAAGTGGGAGAATTATAGGCAAGCAGTCCCGGCTTATGCAAACTTGGACTATTGCTGGATACCTAACCTCAAAGATGCTTTTAGAGAATCCAGAAAAGGCAGCCTCCTTGTTCTGGGAGGAGGATTATGAAATTCTTCAGTCTTGTGTCTGCATGCTCAGCAAAACTGGCAGAAGGAAATGCTCACGTTTTGCTGCAAGATCTCAGATtcttgttta 2006 0.4118 MTTCSCVGISTMKPCRKILSSYKSSSLFGFSPTKLDDSVMELLSRSHPKPIHRRRYNTCNKQVVGYIRVVNLNQTDFNIPDSNWGKSRTFRTSYYVNIGSTRNRSVSFIPNIASDTRNHSTSIDSRANETSFEKIYIQNGLKVKPLVFERIETGPSQLEEVSREDVNIDNLKDLNERKQSEIEKEAWQLLRAALVTYCGNPVGTVAANDPSDKQPLNYDQVFIRDFVPSALAFLLNGEGEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTLPLDGNNEAFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYALQERVDVQTGIRLILKLCLTDGFDMFPTLLVSDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLTVNDATSTLVAAINNRLSALSFHMREYYWVDIKKINEIYRFKTEEYSTDAVNKFNIYPEQVPSWLVDWISDEGGYFIGNLQPAHMDFRFFTLGNLWAIVSSLGTTKQNRGILNLIEAKWDDLVAEMPLKICYPALEGEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMERPDLAQKACDLAEKRLSIDRWPEYYDTRSGRIIGKQSRLMQTWTIAGYLTSKMLLENPEKAASLFWEEDYEILQSCVCMLSKTGRRKCSRFAARSQILV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01239 668 SUPERFAMILY Six-hairpin glycosidases 182 628 IPR008928 GO:0005975
Bva05g01239 668 Pfam Alkaline and neutral invertase 186 627 IPR024746 GO:0033926
Bva05g01239 668 PANTHER - 5 667 IPR024746 GO:0033926
Bva05g01239 668 Coils Coil 168 188 - -
Bva05g01239 668 Gene3D - 216 615 IPR012341 GO:0005975
Bva05g01239 668 PANTHER ALKALINE/NEUTRAL INVERTASE C, MITOCHONDRIAL 5 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01239 Bva-Chr5 6502754 6507020 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01239 - - adu:107462633 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01239 05 6502754 6507020 Bva05g01239 05 6502754 6507020 ECH